부산대학교 도서관

Caufield, Harry; Kroll, Carlo; O'Neil, Shawn T; Reese, Justin T; Joachimiak, Marcin P; Hegde, Harshad; Harris, Nomi L; Krishnamurthy, Madan; McLaughlin, James A; Smedley, Damian; Haendel, Melissa A; Robinson, Peter N; Mungall, Christopher J

Joachimiak, Marcin P; Miller, Mark A; Caufield, J Harry; Ly, Ryan; Harris, Nomi L; Tritt, Andrew; Mungall, Christopher J; Bouchard, Kristofer E

Applied Ontology. Nov2024, Vol. 19 Issue 4, p408-418. 11p.

Caufield, J Harry; Putman, Tim; Schaper, Kevin; Unni, Deepak R; Hegde, Harshad; Callahan, Tiffany J; Cappelletti, Luca; Moxon, Sierra AT; Ravanmehr, Vida; Carbon, Seth; Chan, Lauren E; Cortes, Katherina; Shefchek, Kent A; Elsarboukh, Glass; Balhoff, James P; Fontana, Tommaso; Matentzoglu, Nicolas; Bruskiewich, Richard M; Thessen, Anne E; Harris, Nomi L; Munoz-Torres, Monica C; Haendel, Melissa A; Robinson, Peter N; Joachimiak, Marcin P; Mungall, Christopher J; Reese, Justin T

Borglin, Sharon ; Joyner, Dominique ; DeAngelis, Kristen M ; Khudyakov, Jane ; D’haeseleer, Patrik ; Joachimiak, Marcin P ; Hazen, Terry

In Current Opinion in Biotechnology February 2012 23(1):41-48

Caufield, J Harry; Hegde, Harshad; Emonet, Vincent; Harris, Nomi L; Joachimiak, Marcin P; Matentzoglu, Nicolas; Kim, HyeongSik; Moxon, Sierra; Reese, Justin T; Haendel, Melissa A; Robinson, Peter N; Mungall, Christopher J

Bioinformatics. Mar2024, Vol. 40 Issue 3, p1-10. 10p.

Máša P; Prague University of Economics and Business, Prague 13067, Czech Republic.; Kliegr T; Prague University of Economics and Business, Prague 13067, Czech Republic.; Joachimiak MP; Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

Publisher: Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology Country of Publication: Netherlands NLM ID: 101585369 Publication Model: eCollection Cited Medium: Print ISSN: 2001-0370 (Print) Linking ISSN: 20010370 NLM ISO Abbreviation: Comput Struct Biotechnol J Subsets: PubMed not MEDLINE

Toro, Sabrina; Anagnostopoulos, Anna V; Bello, Susan M; Blumberg, Kai; Cameron, Rhiannon; Carmody, Leigh; Diehl, Alexander D; Dooley, Damion M; Duncan, William D; Fey, Petra; Gaudet, Pascale; Harris, Nomi L; Joachimiak, Marcin P; Kiani, Leila; Lubiana, Tiago; Munoz-Torres, Monica C; O'Neil, Shawn; Osumi-Sutherland, David; Puig-Barbe, Aleix; Reese, Justin T; Reiser, Leonore; Robb, Sofia Mc; Ruemping, Troy; Seager, James; Sid, Eric; Stefancsik, Ray; Weber, Magalie; Wood, Valerie; Haendel, Melissa A; Mungall, Christopher J

J Biomed Semantics
Journal of Biomedical Semantics, Vol 15, Iss 1, Pp 1-16 (2024)
Journal of Biomedical Semantics, vol 15, iss 1

Duncan WD; University of Florida College of Dentistry.; Sabharwal A; Western University.; Diehl AD; University at Buffalo.; Dutta N; Self-Employed Clinician and Clinical Researcher.; Diller M; National Library of Medicine, National Institutes of Health.; Joachimiak MP; Lawrence Berkeley National Laboratory.; Chandrasekharan GM; Indiana University Indianapolis.

Country of Publication: United States NLM ID: 101768035 Publication Model: Electronic Cited Medium: Internet ISSN: 2693-5015 (Electronic) Linking ISSN: 26935015 NLM ISO Abbreviation: Res Sq Subsets: PubMed not MEDLINE

Callahan TJ; Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA. tiffany.callahan@cuanschutz.edu.; Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY, 10032, USA. tiffany.callahan@cuanschutz.edu.; Tripodi IJ; Computer Science Department, Interdisciplinary Quantitative Biology, University of Colorado Boulder, Boulder, CO, 80301, USA.; Stefanski AL; Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA.; Cappelletti L; AnacletoLab, Dipartimento di Informatica, Universit`a degli Studi di Milano, Via Celoria 18, 20133, Milan, Italy.; Taneja SB; Intelligent Systems Program, University of Pittsburgh, Pittsburgh, PA, 15260, USA.; Wyrwa JM; Department of Physical Medicine and Rehabilitation, School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA.; Casiraghi E; AnacletoLab, Dipartimento di Informatica, Universit`a degli Studi di Milano, Via Celoria 18, 20133, Milan, Italy.; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Matentzoglu NA; Semanticly, Athens, Greece.; Reese J; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Silverstein JC; Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15206, USA.; Hoyt CT; Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, 02115, USA.; Boyce RD; Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15206, USA.; Malec SA; Division of Translational Informatics, University of New Mexico School of Medicine, Albuquerque, NM, 87131, USA.; Unni DR; SIB Swiss Institute of Bioinformatics, Basel, Switzerland.; Joachimiak MP; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Robinson PN; Berlin Institute of Health at Charité-Universitatsmedizin, 10117, Berlin, Germany.; Mungall CJ; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Cavalleri E; AnacletoLab, Dipartimento di Informatica, Universit`a degli Studi di Milano, Via Celoria 18, 20133, Milan, Italy.; Fontana T; AnacletoLab, Dipartimento di Informatica, Universit`a degli Studi di Milano, Via Celoria 18, 20133, Milan, Italy.; Valentini G; AnacletoLab, Dipartimento di Informatica, Universit`a degli Studi di Milano, Via Celoria 18, 20133, Milan, Italy.; ELLIS, European Laboratory for Learning and Intelligent Systems, Milan Unit, Italy.; Mesiti M; AnacletoLab, Dipartimento di Informatica, Universit`a degli Studi di Milano, Via Celoria 18, 20133, Milan, Italy.; Gillenwater LA; Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA.; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, 80045, USA.; Santangelo B; Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA.; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, 80045, USA.; Vasilevsky NA; Data Collaboration Center, Critical Path Institute, 1840 E River Rd. Suite 100, Tucson, AZ, 85718, USA.; Hoehndorf R; Computer, Electrical and Mathematical Sciences & Engineering Division, Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Kingdom of Saudi Arabia.; Bennett TD; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, 80045, USA.; Department of Pediatrics, University of Colorado School of Medicine, Aurora, CO, 80045, USA.; Ryan PB; Janssen Research and Development, Raritan, NJ, 08869, USA.; Hripcsak G; Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY, 10032, USA.; Kahn MG; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, 80045, USA.; Bada M; Division of General Internal Medicine, University of Colorado School of Medicine, Aurora, CO, 80045, USA.; Baumgartner WA Jr; Division of General Internal Medicine, University of Colorado School of Medicine, Aurora, CO, 80045, USA. william.baumgartner@cuanschutz.edu.; Hunter LE; Computational Bioscience Program, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA. prof.larry.hunter@gmail.com.; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, 80045, USA. prof.larry.hunter@gmail.com.

Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Joachimiak, Marcin P; Weisman, Jennifer L; May, Barnaby CH

BMC Bioinformatics. 2006, Vol. 7, p225-5. 5p. 3 Color Photographs, 1 Chart.

Arkin, Adam P; Cottingham, Robert W; Henry, Christopher S; Harris, Nomi L; Stevens, Rick L; Maslov, Sergei; Dehal, Paramvir; Ware, Doreen; Perez, Fernando; Canon, Shane; Sneddon, Michael W; Henderson, Matthew L; Riehl, William J; Murphy-Olson, Dan; Chan, Stephen Y; Kamimura, Roy T; Kumari, Sunita; Drake, Meghan M; Brettin, Thomas S; Glass, Elizabeth M; Chivian, Dylan; Gunter, Dan; Weston, David J; Allen, Benjamin H; Baumohl, Jason; Best, Aaron A; Bowen, Ben; Brenner, Steven E; Bun, Christopher C; Chandonia, John-Marc; Chia, Jer-Ming; Colasanti, Ric; Conrad, Neal; Davis, James J; Davison, Brian H; DeJongh, Matthew; Devoid, Scott; Dietrich, Emily; Dubchak, Inna; Edirisinghe, Janaka N; Fang, Gang; Faria, José P; Frybarger, Paul M; Gerlach, Wolfgang; Gerstein, Mark; Greiner, Annette; Gurtowski, James; Haun, Holly L; He, Fei; Jain, Rashmi; Joachimiak, Marcin P; Keegan, Kevin P; Kondo, Shinnosuke; Kumar, Vivek; Land, Miriam L; Meyer, Folker; Mills, Marissa; Novichkov, Pavel S; Oh, Taeyun; Olsen, Gary J; Olson, Robert; Parrello, Bruce; Pasternak, Shiran; Pearson, Erik; Poon, Sarah S; Price, Gavin A; Ramakrishnan, Srividya; Ranjan, Priya; Ronald, Pamela C; Schatz, Michael C; Seaver, Samuel M D; Shukla, Maulik; Sutormin, Roman A; Syed, Mustafa H; Thomason, James; Tintle, Nathan L; Wang, Daifeng; Xia, Fangfang; Yoo, Hyunseung; Yoo, Shinjae; Yu, Dantong

Nature Biotechnology. July, 2018, Vol. 36 Issue 7, p566, 4 p.

Caufield JH; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Putman T; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Schaper K; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Unni DR; SIB Swiss Institute of Bioinformatics, Basel 1015, Switzerland.; Hegde H; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Callahan TJ; Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY 10032, United States.; Cappelletti L; Department of Computer Science, University of Milano, Milan 20126, Italy.; Moxon SAT; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Ravanmehr V; Department of Lymphoma-Myeloma, MD Anderson Cancer Center, Houston, TX 77030, United States.; Carbon S; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Chan LE; College of Public Health and Human Sciences, Oregon State University, Corvallis, OR 97331, United States.; Cortes K; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Shefchek KA; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Elsarboukh G; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Balhoff J; Renaissance Computing Institute, University of North Carolina, Chapel Hill, NC 27517, United States.; Fontana T; Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan 20133, Italy.; Matentzoglu N; Semanticly, Athens, Greece.; Bruskiewich RM; STAR Informatics, Delphinai Corporation, Sooke, BC V9Z 0M3, Canada.; Thessen AE; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Harris NL; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Munoz-Torres MC; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Haendel MA; Anschutz Medical Campus, University of Colorado, Aurora, CO 80045, United States.; Robinson PN; The Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, United States.; Joachimiak MP; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Mungall CJ; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.; Reese JT; Division of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.

Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Joachimiak, Marcin P; Caufield, J Harry; Harris, Nomi L; Kim, Hyeongsik; Mungall, Christopher J

ArXiv, vol 4, iss 06-07

Joachimiak MP; Biosystems Data Science Department, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.; Caufield JH; Biosystems Data Science Department, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.; Harris NL; Biosystems Data Science Department, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.; Kim H; Robert Bosch LLC, Sunnyvale, CA 94085, USA.; Mungall CJ; Biosystems Data Science Department, Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.

Country of Publication: United States NLM ID: 101759493 Publication Model: Electronic Cited Medium: Internet ISSN: 2331-8422 (Electronic) Linking ISSN: 23318422 NLM ISO Abbreviation: ArXiv Subsets: PubMed not MEDLINE

Santangelo BE; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.; Apgar M; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.; Colorado ASB; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.; Martin CG; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.; Sterrett J; Department of Integrative Physiology, University of Colorado, Boulder, CO, United States.; Wall E; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.; Joachimiak MP; Lawrence Berkeley National Laboratory, Environmental Genomics and Systems Biology Division, Biosystems Data Science Department, Berkeley, CA, United States.; Hunter LE; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.; Lozupone CA; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, United States.

Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE

Ladau J; Departments of Computational Precision Health and Dermatology, University of California, San Francisco, CA, 94115, USA.; Arva Intelligence, Inc., Salt Lake City, UT, 84101, USA.; Computational Biosciences Group, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Brodie EL; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Falco N; Earth and Environmental Sciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Bansal I; Computational Biosciences Group, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Hoffman EB; Arva Intelligence, Inc., Salt Lake City, UT, 84101, USA.; Graduate Group in Biostatistics, University of California, Berkeley, CA, 94720, USA.; Joachimiak MP; Biosystems Data Science, Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Mora AM; Center for Environmental Research and Community Health (CERCH), School of Public Health, University of California, Berkeley, CA, 94720, USA.; Walker AM; Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, TN, 37996, USA.; Wainwright HM; Department of Nuclear Science and Engineering, Massachusetts Institute of Technology, Boston, MA, 02139, USA.; Wu Y; Graduate Group in Biostatistics, University of California, Berkeley, CA, 94720, USA.; Pavicic M; Biosciences, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA.; Jacobson D; Biosciences, Oak Ridge National Laboratory, Oak Ridge, TN, 37830, USA.; Hess M; University of California, Davis, CA, 95616, USA.; Brown JB; Arva Intelligence, Inc., Salt Lake City, UT, 84101, USA.; Computational Biosciences Group, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.; Statistics Department, University of California, Berkeley, CA, 94720, USA.; Abuabara K; Departments of Computational Precision Health and Dermatology, University of California, San Francisco, CA, 94115, USA.; Division of Epidemiology and Biostatistics, University of California Berkeley School of Public Health, 2121 Berkeley Way, Berkeley, CA, 94720, USA.

Publisher: KeAi Communications Co., Ltd Country of Publication: China NLM ID: 101692406 Publication Model: eCollection Cited Medium: Internet ISSN: 2468-0427 (Electronic) Linking ISSN: 24680427 NLM ISO Abbreviation: Infect Dis Model Subsets: PubMed not MEDLINE

Park H; Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, China.; EPSRC/BBSRC Future Biomanufacturing Research Hub, EPSRC Synthetic Biology Research Centre SYNBIOCHEM Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, Manchester, United Kingdom.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Joachimiak MP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Jungbluth SP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Yang Z; Computational Science Initiative, Brookhaven National Laboratory, Upton, New York, USA.; Riehl WJ; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Canon RS; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; National Energy Research Scientific Computing Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Arkin AP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Department of Bioengineering, University of California, Berkeley, California, USA.; Dehal PS; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

Joachimiak MP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America.

Publisher: Public Library of Science Country of Publication: United States NLM ID: 101291488 Publication Model: eCollection Cited Medium: Internet ISSN: 1935-2735 (Electronic) Linking ISSN: 19352727 NLM ISO Abbreviation: PLoS Negl Trop Dis Subsets: MEDLINE

Zhou, Aifen; Baidoo, Edward; He, Zhili; Mukhopadhyay, Aindrila; Baumohl, Jason K; Benke, Peter; Joachimiak, Marcin P; Xie, Ming; Song, Rong; Arkin, Adam P; Hazen, Terry C; Keasling, Jay D; Wall, Judy D; Stahl, David A; Zhou, Jizhong

ISME Journal: Multidisciplinary Journal of Microbial Ecology. Sep2013, Vol. 7 Issue 9, p1790-1802. 13p.

Walker, Christopher B; Redding-Johanson, Alyssa M; Baidoo, Edward E; Rajeev, Lara; He, Zhili; Hendrickson, Erik L; Joachimiak, Marcin P; Stolyar, Sergey; Arkin, Adam P; Leigh, John A; Zhou, Jizhong; Keasling, Jay D; Mukhopadhyay, Aindrila; Stahl, David A

ISME Journal: Multidisciplinary Journal of Microbial Ecology. Nov2012, Vol. 6 Issue 11, p2045-2055. 11p.