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e-Article

Chemoproteomics-enabled discovery of covalent RNF114-based degraders that mimic natural product function.
Document Type
article
Source
Cell chemical biology. 28(4)
Subject
Humans
Ubiquitin-Protein Ligases
Biological Products
Proteomics
Molecular Structure
Ubiquitination
PROTAC
RNF114
chemoproteomics
covalent ligand
cysteine
targeted protein degradation
Biotechnology
Development of treatments and therapeutic interventions
5.1 Pharmaceuticals
Generic health relevance
Language
Abstract
The translation of functionally active natural products into fully synthetic small-molecule mimetics has remained an important process in medicinal chemistry. We recently discovered that the terpene natural product nimbolide can be utilized as a covalent recruiter of the E3 ubiquitin ligase RNF114 for use in targeted protein degradation-a powerful therapeutic modality within modern-day drug discovery. Using activity-based protein profiling-enabled covalent ligand-screening approaches, here we report the discovery of fully synthetic RNF114-based recruiter molecules that can also be exploited for PROTAC applications, and demonstrate their utility in degrading therapeutically relevant targets, such as BRD4 and BCR-ABL, in cells. The identification of simple and easily manipulated drug-like scaffolds that can mimic the function of a complex natural product is beneficial in further expanding the toolbox of E3 ligase recruiters, an area of great importance in drug discovery and chemical biology.