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e-Article

Full Molecular Typing of Neisseria meningitidisDirectly from Clinical Specimens for Outbreak Investigation
Document Type
Article
Source
Journal of Clinical Microbiology; September 2020, Vol. 58 Issue: 12
Subject
Language
ISSN
00951137; 1098660X
Abstract
Neisseria meningitidisis a leading cause of bacterial meningitis and sepsis worldwide and an occasional cause of meningococcal urethritis. When isolates are unavailable for surveillance or outbreak investigations, molecular characterization of pathogens needs to be performed directly from clinical specimens, such as cerebrospinal fluid (CSF), blood, or urine. However, genome sequencing of specimens is challenging because of low bacterial and high human DNA abundances. We developed selective whole-genome amplification (SWGA), an isothermal multiple-displacement amplification-based method, to efficiently enrich, sequence, and de novoassemble N. meningitidisDNA from clinical specimens with low bacterial loads.