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e-Article

Mms2–Ubc13 covalently bound to ubiquitin reveals the structural basis of linkage-specific polyubiquitin chain formation.
Document Type
Article
Source
Nature Structural & Molecular Biology. Oct2006, Vol. 13 Issue 10, p915-920. 6p. 3 Diagrams, 1 Chart, 2 Graphs.
Subject
*UBIQUITIN
*BINDING sites
*DNA damage
*LYSINE
*CELLULAR signal transduction
*SACCHAROMYCES cerevisiae
*MUTAGENESIS
Language
ISSN
1545-9993
Abstract
Lys63-linked polyubiquitin chains participate in nonproteolytic signaling pathways, including regulation of DNA damage tolerance and NF-κB activation. E2 enzymes bound to ubiquitin E2 variants (UEV) are vital in these pathways, synthesizing Lys63-linked polyubiquitin chains, but how these complexes achieve specificity for a particular lysine linkage has been unclear. We have determined the crystal structure of an Mms2–Ubc13-ubiquitin (UEV–E2-Ub) covalent intermediate with donor ubiquitin linked to the active site residue of Ubc13. In the structure, the unexpected binding of a donor ubiquitin of one Mms2–Ubc13-Ub complex to the acceptor-binding site of Mms2–Ubc13 in an adjacent complex allows us to visualize at atomic resolution the molecular determinants of acceptor-ubiquitin binding. The structure reveals the key role of Mms2 in allowing selective insertion of Lys63 into the Ubc13 active site and suggests a molecular model for polyubiquitin chain elongation. [ABSTRACT FROM AUTHOR]