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e-Article

Assessing the influence of pH and cationic strength on i-motif DNA structure.
Document Type
Article
Source
Analytical & Bioanalytical Chemistry. Nov2019, Vol. 411 Issue 28, p7473-7479. 7p.
Subject
*CHEMICAL stability
*DNA
*DNA structure
*NUCLEIC acids
Language
ISSN
1618-2642
Abstract
The i-motif is a biologically relevant non-canonical DNA structure formed by cytosine-rich sequences. Despite the importance of the factors affecting the formation/stability of such a structure, like pH, cation type and concentration, no systematic study that simultaneously analysed their effect on the i-motif in vitro has been carried out so far. Therefore, here we report a systematic study that aims to evaluate the effect of these factors, and their possible interaction, on the formation of an i-motif structure. Our results confirm that pH plays the main role in i-motif formation. However, we demonstrate that the effect of the cation concentration on the i-motif is strictly dependent on the pH, while no significant differences are observed among the investigated cation types. [ABSTRACT FROM AUTHOR]