부산대학교 도서관

Marakulina, D; Vorontsov, IE; Kulakovskiy, IV; Lennartsson, A; Drablos, F; Medvedeva, YA

NUCLEIC ACIDS RESEARCH. 51(D1):D564-D570

Khoroshkin, M; Buyan, A; Dodel, M; Navickas, A; Yu, J; Trejo, F; Doty, A; Baratam, R; Zhou, S; Lee, SB; Joshi, T; Garcia, K; Choi, B; Miglani, S; Subramanyam, V; Modi, H; Carpenter, C; Markett, D; Corces, MR; Mardakheh, FK; Kulakovskiy, IV; Goodarzi, H

Nat Commun
Nature Communications, Vol 15, Iss 1, Pp 1-21 (2024)
Nature Communications, vol 15, iss 1

Ramilowski, JA; Yip, CW; Agrawal, S; Chang, J-C; Ciani, Y; Kulakovskiy, IV; Mendez, M; Ooi, JLC; Ouyang, JF; Parkinson, N

GENOME RESEARCH. 30(7):1060-1072

Ramilowski, JA; Yip, CW; Agrawal, S; Chang, J-C; Ciani, Y; Kulakovskiy, IV; Mendez, M; Ooi, JLC; Ouyang, JF; Parkinson, N; Petri, A; Roos, L; Severin, J; Yasuzawa, K; Abugessaisa, I; Akalin, A; Antonov, IV; Arner, E; Bonetti, A; Bono, H; Borsari, B; Brombacher, F; Cameron, CJF; Cannistraci, CV; Cardenas, R; Cardon, M; Chang, H; Dostie, J; Ducoli, L; Favorov, A; Fort, A; Garrido, D; Gil, N; Gimenez, J; Guler, R; Handoko, L; Harshbarger, J; Hasegawa, A; Hasegawa, Y; Hashimoto, K; Hayatsu, N; Heutink, P; Hirose, T; Imada, EL; Itoh, M; Kaczkowski, B; Kanhere, A; Kawabata, E; Kawaji, H; Kawashima, T; Kelly, ST; Kojima, M; Kondo, N; Koseki, H; Kouno, T; Kratz, A; Kurowska-Stolarska, M; Kwon, ATJ; Leek, J; Lennartsson, A; Lizio, M; Lopez-Redondo, F; Luginbuhl, J; Maeda, S; Makeev, VJ; Marchionni, L; Medvedeva, YA; Minoda, A; Muller, F; Munoz-Aguirre, M; Murata, M; Nishiyori, H; Nitta, KR; Noguchi, S; Noro, Y; Nurtdinov, R; Okazaki, Y; Orlando, V; Paquette, D; Parr, CJC; Rackham, OJL; Rizzu, P; Martinez, DFS; Sandelin, A; Sanjana, P; Semple, CAM; Shibayama, Y; Sivaraman, DM; Suzuki, T; Szumowski, SC; Tagami, M; Taylor, MS; Terao, C; Thodberg, M; Thongjuea, S; Tripathi, V; Ulitsky, I; Verardo, R; Vorontsov, IE; Yamamoto, C; Young, RS; Baillie, JK; Forrest, ARR; Guigo, R; Hoffman, MM; Hon, CC; Kasukawa, T; Kauppinen, S; Kere, J; Lenhard, B; Schneider, C; Suzuki, H; Yagi, K; De Hoon, MJL; Shin, JW; Carninci, P

Forrest, ARR; Kawaji, H; Rehli, M; Baillie, JK; de, Hoon MJL; Haberle, V; Lassmann, T; Kulakovskiy, IV; Lizio, M; Itoh, M

NATURE. 507(7493):462-470

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Proceedings of the National Academy of Sciences. 111:5289-5294

Buyan A; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia.; Meshcheryakov G; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Safronov V; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Abramov S; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Altius Institute for Biomedical Sciences, Seattle, WA, USA.; Moscow Center for Advanced Studies, Moscow, Russia.; Boytsov A; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Altius Institute for Biomedical Sciences, Seattle, WA, USA.; Moscow Center for Advanced Studies, Moscow, Russia.; Nozdrin V; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Baulin EF; Moscow Center for Advanced Studies, Moscow, Russia.; International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.; Kolmykov S; Department of Computational Biology, Sirius University of Science and Technology, Sirius, Krasnodar region, Russia.; Vierstra J; Altius Institute for Biomedical Sciences, Seattle, WA, USA.; Kolpakov F; Department of Computational Biology, Sirius University of Science and Technology, Sirius, Krasnodar region, Russia.; Bioinformatics Laboratory, Federal Research Center for Information and Computational Technologies, Novosibirsk, Russia.; Makeev VJ; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia. vsevolod.makeev@gmail.com.; Moscow Center for Advanced Studies, Moscow, Russia. vsevolod.makeev@gmail.com.; Institute of Biochemistry and Genetics, Ufa Federal Research Centre of the Russian Academy of Sciences, Ufa, Russia. vsevolod.makeev@gmail.com.; Cancer Research UK National Biomarker Centre, University of Manchester, Manchester, UK. vsevolod.makeev@gmail.com.; Kulakovskiy IV; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia. ivan.kulakovskiy@gmail.com.; Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia. ivan.kulakovskiy@gmail.com.; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia. ivan.kulakovskiy@gmail.com.

Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Gryzunov N; Penzar D; Kamenets V; Vyaltsev V; Kozin I; Eliseeva IA; Nozdrin V; Vorontsov IE; Bushuev S; Strekalovskikh V; Zinkevich A; Andrews G; Bedarew M; Blass I; Frolov D; Lariushina I; Moore J; Orenstein Y; Roev G; Salimov D; Shimshoviz N; Tziony I; Weng Z; Bucher P; Deplancke B; Fornes O; Grau J; Grosse I; Jolma A; Kolpakov FA; Makeev VJ; Hughes TR; Kulakovskiy IV

Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Vorontsov IE; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Kozin I; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Abramov S; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Altius Institute for Biomedical Sciences, Seattle, WA, USA.; Boytsov A; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Altius Institute for Biomedical Sciences, Seattle, WA, USA.; Jolma A; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Albu M; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Ambrosini G; École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Bioinformatics Competence Center, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Bioinformatics Competence Center, Université de Lausanne, Lausanne, Switzerland.; Faltejskova K; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, 160 00 Praha 6, Staré Město, Czech Republic.; Computer Science Institute, Faculty of Mathematics and Physics, Charles University, 118 00 Praha 1, Staré Město, Czech Republic.; Gralak AJ; Laboratory of Systems Biology and Genetics, Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.; Gryzunov N; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia.; Inukai S; Chugai Pharmaceutical Co., Ltd, Tokyo, Japan.; Kolmykov S; Department of Computational Biology, Sirius University of Science and Technology, Sirius, Krasnodar region, Russia.; Kravchenko P; Max Planck Institute of Biochemistry, Planegg, Germany.; Kribelbauer-Swietek JF; Laboratory of Systems Biology and Genetics, Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.; Laverty KU; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Nozdrin V; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Patel ZM; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Penzar D; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Plescher ML; Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle, Germany.; Pour SE; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Razavi R; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Yang AWH; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada.; Yevshin I; Biosoft.Ru LLC, Novosibirsk, Russia.; Zinkevich A; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Weirauch MT; Cincinnati Children's Hospital, Cincinnati, OH, USA.; Bucher P; Swiss Institute of Bioinformatics, Lausanne, Switzerland.; Deplancke B; Laboratory of Systems Biology and Genetics, Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland.; Fornes O; Department of Medical Genetics, Centre for Molecular Medicine and Therapeutics, BC Children's Hospital Research Institute, University of British Columbia, Vancouver, BC, Canada.; Grau J; Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle, Germany.; Grosse I; Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle, Germany.; Kolpakov FA; Department of Computational Biology, Sirius University of Science and Technology, Sirius, Krasnodar region, Russia.; Bioinformatics Laboratory, Federal Research Center for Information and Computational Technologies, Novosibirsk, Russia.; Makeev VJ; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia. seva.makeev@cruk.manchester.ac.uk.; Moscow Center for Advanced Studies, Moscow, Russia. seva.makeev@cruk.manchester.ac.uk.; Cancer Research UK National Biomarker Centre, University of Manchester, Manchester, UK. seva.makeev@cruk.manchester.ac.uk.; Hughes TR; Donnelly Centre and Department of Molecular Genetics, Toronto, ON, Canada. t.hughes@utoronto.ca.; Kulakovskiy IV; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia. ivan.kulakovskiy@gmail.com.; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia. ivan.kulakovskiy@gmail.com.; Institute of Biochemistry and Genetics, Ufa Federal Research Centre of Russian Academy of Sciences, Ufa, Russia. ivan.kulakovskiy@gmail.com.

Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN: 2399-3642 (Electronic) Linking ISSN: 23993642 NLM ISO Abbreviation: Commun Biol Subsets: MEDLINE

Zamuner FT; Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.; Chan SS; Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD 20910, USA.; Department of Computer Science, University of Maryland, College Park, MD 20910, USA.; Kessler MD; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.; Department of Otorhinolaryngology-Head and Neck Surgery, Marlene and Stewart Greenebaum Comprehensive Cancer Center, University of Maryland Medical Center, Baltimore, MD 21201, USA.; Vorontsov IE; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.; Loginov A; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.; Department of Otorhinolaryngology-Head and Neck Surgery, Marlene and Stewart Greenebaum Comprehensive Cancer Center, University of Maryland Medical Center, Baltimore, MD 21201, USA.; Erbe R; Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD 21231, USA.; Imada E; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY 10065, USA.; Xie DX; Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.; Guo T; Department of Otolaryngology-Head and Neck Surgery, University of California, San Diego Health, La Jolla, San Diego, CA 92037, USA.; Moores Cancer Center, University of California, San Diego Health, La Jolla, San Diego, CA 92037, USA.; Fertig EJ; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA.; Kulakovskiy IV; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.; Institute of Protein Research, Russian Academy of Sciences, Pushchino 142290, Russia.; Institute of Biochemistry and Genetics, Ufa Federal Research Centre of Russian Academy of Sciences, Ufa 450054, Russia.; Danilova L; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA.; Favorov AV; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.; Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA.; Gaykalova DA; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.; Department of Otorhinolaryngology-Head and Neck Surgery, Marlene and Stewart Greenebaum Comprehensive Cancer Center, University of Maryland Medical Center, Baltimore, MD 21201, USA.; Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD 21231, USA.

Publisher: Cell Press Country of Publication: United States NLM ID: 101724038 Publication Model: eCollection Cited Medium: Internet ISSN: 2589-0042 (Electronic) Linking ISSN: 25890042 NLM ISO Abbreviation: iScience Subsets: PubMed not MEDLINE

Świrski MI; Faculty of Biology, Institute of Genetics and Biotechnology, University of Warsaw, Warsaw, Poland. michal.swirski@uw.edu.pl.; Tierney JAS; School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland. jackt@ebi.ac.uk.; European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK. jackt@ebi.ac.uk.; Albà MM; Hospital del Mar Research Institute, Barcelona, Spain.; Catalan Institution for Research and Advanced Studies, Barcelona, Spain.; Andreev DE; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.; Aspden JL; School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, UK.; Leeds Omics, University of Leeds, Leeds, UK.; Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, UK.; Atkins JF; School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.; Department of Human Genetics, University of Utah, Salt Lake City, UT, USA.; Bassani-Sternberg M; University Hospital of Lausanne, Lausanne, Switzerland.; Ludwig Institute for Cancer Research, Lausanne, Switzerland.; Berry MJ; Pacific Biosciences Research Center, University of Hawaii at Manoa, Honolulu, HI, USA.; Biffo S; National Institute of Molecular Genetics, Milan, Italy.; University of Milan, Milan, Italy.; Boris-Lawrie K; Department of Veterinary and Biomedical Sciences, University of Minnesota, Saint Paul, MN, USA.; Borodovsky M; Wallace H. Coulter Department of Biomedical Engineering, Georgia Tech, Atlanta, GA, USA.; School of Computational Science and Engineering, Georgia Tech, Atlanta, GA, USA.; Brierley I; Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK.; Brook M; Centre for Cardiovascular Sciences, Institute for Neuroscience and Cardiovascular Research, University of Edinburgh, Edinburgh, UK.; Brunet MA; University of Sherbrooke, Sherbrooke, Quebec, Canada.; Cancer Research Institute of the University of Sherbrooke (IRCUS), Sherbrooke, Quebec, Canada.; Bujnicki JM; International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.; Caliskan N; Regensburg Center for Biochemistry (RCB), University of Regensburg, Regensburg, Germany.; Helmholtz Institute for RNA-Based Infection Research, Helmholtz Centre for Infection Research (HIRI-HZI), Würzburg, Germany.; Calviello L; Human Technopole, Milan, Italy.; Carvunis AR; Department of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.; Pittsburgh Center for Evolutionary Biology and Medicine (CEBaM), School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.; Cate JHD; University of California Berkeley, Berkeley, CA, USA.; Cenik C; Department of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA.; Chang KY; Graduate Institute of Biochemistry, National Chung-Hsing University, Taichung, Taiwan.; Chen Y; Department of Bioinformatics & Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.; Chothani S; Centre for Computational Biology, Duke-NUS Medical School, Singapore, Singapore.; Choudhary JS; Functional Proteomics team, Chester Beatty Laboratories, The Institute of Cancer Research, London, UK.; Clark PL; Department of Chemistry & Biochemistry, University of Notre Dame, Notre Dame, IN, USA.; Clauwaert J; University of Michigan, Ann Arbor, MI, USA.; Cooley L; Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.; Dassi E; Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento, Trento, Italy.; Dean K; School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.; Diaz JJ; Centre de Recherche en Cancérologie de Lyon, Inserm U1052, CNRS UMR5286, Université de Lyon, Université Claude Bernard Lyon, Centre Léon Bérard, LabEx Dev2CAN, Lyon, France.; Dieterich C; Klaus Tschira Institute for Integrative Computational Cardiology, Heidelberg, Germany.; German Center for Cardiovascular Research (DZHK) - partner site Heidelberg/Mannheim, Heidelberg, Germany.; Dikstein R; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel.; Dinman JD; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, USA.; Institute for Bioscience and Biotechnology Research, Rockville, MD, USA.; Dmitriev SE; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Dontsova OA; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.; Faculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia.; Center of Life Sciences, Skolkovo Institute of Science and Technology, Moscow, Russia.; Dunham CM; Department of Chemistry, Emory University, Atlanta, GA, USA.; Eswarappa SM; Department of Biochemistry, Indian Institute of Science, Bangalore, India.; Farabaugh PJ; University of Maryland Baltimore County, Baltimore, MD, USA.; Faridi P; Centre for Cancer Research, Hudson Institute of Medical Research, Melbourne, Victoria, Australia.; Monash Proteomics and Metabolomics Platform, Department of Medicine, School of Clinical Sciences, Monash University, Melbourne, Victoria, Australia.; Fierro-Monti I; European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.; Firth AE; Division of Virology, Department of Pathology, University of Cambridge, Cambridge, UK.; Gatfield D; Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.; Gebauer F; Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain.; Gelfand MS; Center of Life Sciences, Skolkovo Institute of Science and Technology, Moscow, Russia.; Gray NK; Centre for Reproductive Health, Institute for Regeneration and Repair, University of Edinburgh, Edinburgh, UK.; Green R; Howard Hughes Medical Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA.; Hill CH; Department of Biology, University of York, York, UK.; York Structural Biology Laboratory, University of York, York, UK.; York Biomedical Research Institute, University of York, York, UK.; Hou YM; Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.; Hübner N; Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; Charite - Universitätsmedizin Berlin, Berlin, Germany.; Helmholtz Institute for Translational AngioCardioScience (HI-TAC) of the Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC) at Heidelberg University, Heidelberg, Germany.; German Center for Cardiovascular Research (DZHK) - partner site Berlin, Berlin, Germany.; Ignatova Z; Institute for Biochemistry and Molecular Biology, University of Hamburg, Hamburg, Germany.; Ivanov P; Division of Rheumatology, Inflammation and Immunity, Brigham and Women's Hospital, Boston, MA, USA.; Department of Medicine, Harvard Medical School, Boston, MA, USA.; Iwasaki S; RNA Systems Biochemistry Laboratory, Pioneering Research Institute, RIKEN, Wako, Japan.; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan.; Johnson R; School of Biology and Environmental Science, University College Dublin, Dublin, Ireland.; Jomaa A; Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA, USA.; Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, USA.; Jovanovic M; Columbia University, New York, NY, USA.; Jungreis I; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Kellis M; Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Kieft JS; New York Structural Biology Center, New York, NY, USA.; Kochetov AV; Institute of Cytology & Genetics, Novosibirsk, Russia.; Koonin EV; Computational Biology Branch, Division of Intramural Research, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.; Korostelev AA; RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA, USA.; Kufel J; Faculty of Biology, Institute of Genetics and Biotechnology, University of Warsaw, Warsaw, Poland.; Kulakovskiy IV; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Kurian L; Institute for Cardiovascular Physiology, Goethe University Frankfurt, Frankfurt, Germany.; German Center for Cardiovascular Research (DZHK), Partner Site Rhein-Main, Frankfurt, Germany.; Cardio-Pulmonary Institute (CPI), Goethe University Frankfurt, Frankfurt, Germany.; Lafontaine DLJ; RNA Molecular Biology, Université libre de Bruxelles, Gosselies, Belgium.; Fonds de la Recherche Scientifique (F.R.S./FNRS), Brussels, Belgium.; Larsson O; Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden.; Loughran G; EIRNA Bio, Cork, Ireland.; Lukeš J; Institute of Parasitology, Biology Centre, České Budějovice, Czech Republic.; Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic.; Mariotti M; Department of Genetics, Microbiology and Statistics, Universitat de Barcelona, Barcelona, Spain.; Martens-Uzunova ES; Erasmus MC Cancer Institute, University Medical Center Rotterdam, Department of Urology, Rotterdam, the Netherlands.; Martinez TF; Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, CA, USA.; Department of Biological Chemistry, University of California, Irvine, Irvine, CA, USA.; Chao Family Comprehensive Cancer Center, University of California, Irvine, Irvine, CA, USA.; Matsumoto A; Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan.; McManus J; Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, USA.; Computational Biology Department, Carnegie Mellon University, Pittsburgh, PA, USA.; Medenbach J; University Hospital RWTH Aachen, Aachen, Germany.; Melnikov SV; Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK.; Menschaert G; Faculty of Bioscience Engineering, Department of Data Analysis and Mathematical Modelling, Ghent University, Ghent, Belgium.; Merchante C; Instituto de Hortofruticultura Subtropical y Mediterránea La Mayora (IHSM-UMA-CSIC), Málaga, Spain.; Mikl M; Department of Human Biology, University of Haifa, Haifa, Israel.; Miller WA; Plant Pathology, Entomology & Microbiology Department, Iowa State University, Ames, Iowa, USA.; Mühlemann O; Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Bern, Switzerland.; Namy O; CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, Gif-sur-Yvette, France.; Nedialkova DD; Max Planck Institute of Biochemistry, Martinsried, Germany.; Department of Bioscience, TUM School of Natural Sciences, Garching, Germany.; Nosek J; Faculty of Natural Sciences, Department of Biochemistry, Comenius University Bratislava, Bratislava, Slovakia.; Orchard S; European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.; Ozretić P; Laboratory for Hereditary Cancer, Division of Molecular Medicine, Ruđer Bošković Institute, Zagreb, Croatia.; Pertea M; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.; Pervouchine DD; Center of Life Sciences, Skolkovo Institute of Science and Technology, Moscow, Russia.; Romão L; Instituto Nacional de Saúde Doutor Ricardo Jorge, Lisboa, Portugal.; BioISI-Biosystems Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, Lisboa, Portugal.; Ron D; Cambridge Institute for Medical Research, Department of Clinical Biochemistry, University of Cambridge, Cambridge, UK.; Roucou X; Department of Biochemistry and Functional Genomics, Université de Sherbrooke, Sherbrooke, Quebec, Canada.; Centre de Recherche du Centre Hospitalier Universitaire de Sherbrooke (CRCHUS), Sherbrooke, Quebec, Canada.; Rubtsova MP; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.; Faculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia.; Ruiz-Orera J; Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; Saghatelian A; Salk Institute, La Jolla, CA, USA.; University of California, San Diego, La Jolla, CA, USA.; Salzberg SL; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.; Center for Computational Biology, Johns Hopkins University, Baltimore, MD, USA.; Seale LA; Pacific Biosciences Research Center, University of Hawaii at Manoa, Honolulu, HI, USA.; Seoighe C; School of Mathematical and Statistical Sciences, University of Galway, Galway, Ireland.; Sergiev PV; Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.; Shah P; Rutgers University, Piscataway, NJ, USA.; Shirokikh N; School of Human Sciences, University of Western Australia, Perth, Western Australia, Australia.; Slavoff SA; Department of Chemistry, Yale University, New Haven, CT, USA.; Sonenberg N; Department of Biochemistry, McGill University, Montréal, Quebec, Canada.; Rosalind and Morris Goodman Cancer Research Centre, McGill University, Montréal, Quebec, Canada.; Stasevich TJ; Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.; Szczesny RJ; Laboratory of RNA Biology, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.; Tamm T; Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.; Tchórzewski M; Department of Molecular Biology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Lublin, Poland.; Topisirovic I; Department of Biochemistry, McGill University, Montréal, Quebec, Canada.; Lady Davis Institute, Gerald Bronfman Department of Oncology, Division of Experimental Medicine, McGill University, Montréal, Quebec, Canada.; Tremblay ML; Department of Biochemistry, McGill University, Montréal, Quebec, Canada.; Rosalind and Morris Goodman Cancer Research Centre, McGill University, Montréal, Quebec, Canada.; Tuller T; Department of Biomedical Engineering, Tel-Aviv University, Tel Aviv, Israel.; Ulitsky I; Department of Immunology and Regenerative Biology, Weizmann Institute of Science, Rehovot, Israel.; Valášek LS; Laboratory of Regulation of Gene Expression, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic.; Van Damme P; iRIP Unit, Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, Ghent, Belgium.; Viero G; Institute of Biophysics CNR, Trento, Italy.; Vizcaino JA; European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, UK.; Vogel C; Department of Biology, New York University, New York, NY, USA.; Wallace EWJ; School of Biological Sciences, University of Edinburgh, Edinburgh, UK.; Weissman JS; Whitehead Institute, Cambridge, MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA.; Westhof E; Université de Strasbourg, Institut de Biologie Moléculaire et Cellulaire, Architecture et Réactivité de l'ARN, CNRS UPR9002, Strasbourg, France.; Engineering Research Center of Clinical Functional Materials and Diagnosis & Treatment Devices of Zhejiang Province, Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, China.; Whiffin N; Big Data Institute, University of Oxford, Oxford, UK.; Centre for Human Genetics, University of Oxford, Oxford, UK.; Wilson DN; Institute for Biochemistry and Molecular Biology, University of Hamburg, Hamburg, Germany.; Xie Z; State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou, China.; Yewdell JW; Cellular Biology Section, Laboratory of Viral Diseases, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, Bethesda, MD, USA.; Yordanova MM; School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.; Yu CH; Department of Biochemistry and Molecular Biology, National Cheng Kung University, Tainan, Taiwan.; Institute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, Taiwan.; Yurchenko V; Life Science Research Centre, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.; Zagrovic B; Department of Structural and Computational Biology, Max Perutz Labs, University of Vienna, Vienna, Austria.; Valen E; Department of Biosciences, University of Oslo, Oslo, Norway. eivind.valen@ibv.uio.no.; Computational Biology Unit, Department of Informatics, University of Bergen, Bergen, Norway. eivind.valen@ibv.uio.no.; Baranov PV; School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland. p.baranov@ucc.ie.

Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: In Process; MEDLINE

Khoroshkin M; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Buyan A; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Dodel M; Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, London, UK.; Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK.; Navickas A; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Institut Curie, UMR3348 CNRS, U1278, Inserm, Orsay, France.; Yu J; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Trejo F; College of Arts and Sciences, University of San Francisco, San Francisco, CA, USA.; Doty A; College of Arts and Sciences, University of San Francisco, San Francisco, CA, USA.; Baratam R; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Zhou S; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Arc Institute, Palo Alto, CA, USA.; Lee SB; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Joshi T; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Garcia K; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Choi B; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Miglani S; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Subramanyam V; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Modi H; Gladstone Institute of Neurological Disease, San Francisco, CA, USA.; Gladstone Institute of Data Science and Biotechnology, San Francisco, CA, USA.; Department of Neurology, University of California San Francisco, San Francisco, CA, USA.; Carpenter C; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Markett D; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Corces MR; Gladstone Institute of Neurological Disease, San Francisco, CA, USA.; Gladstone Institute of Data Science and Biotechnology, San Francisco, CA, USA.; Department of Neurology, University of California San Francisco, San Francisco, CA, USA.; Mardakheh FK; Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, London, UK. faraz.mardakheh@bioch.ox.ac.uk.; Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK. faraz.mardakheh@bioch.ox.ac.uk.; Kulakovskiy IV; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia. ivan.kulakovskiy@gmail.com.; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia. ivan.kulakovskiy@gmail.com.; Goodarzi H; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA. hani.goodarzi@arcinstitute.org.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA. hani.goodarzi@arcinstitute.org.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA. hani.goodarzi@arcinstitute.org.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA. hani.goodarzi@arcinstitute.org.; Arc Institute, Palo Alto, CA, USA. hani.goodarzi@arcinstitute.org.

Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: PubMed not MEDLINE; MEDLINE

Medvedeva, YA; Lennartsson, A; Ehsani, R; Kulakovskiy, IV; Vorontsov, IE; Panahandeh, P; Khimulya, G; Kasukawa, T; Drablos, F

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION. 2015

Rafi AM; University of British Columbia, Vancouver, British Columbia, Canada. rafi11@student.ubc.ca.; Nogina D; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Penzar D; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; AIRI, Moscow, Russia.; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Lee D; Seoul National University, Seoul, South Korea.; Lee D; Seoul National University, Seoul, South Korea.; Kim N; Seoul National University, Seoul, South Korea.; Kim S; Seoul National University, Seoul, South Korea.; Kim D; Seoul National University, Seoul, South Korea.; Shin Y; Seoul National University, Seoul, South Korea.; Kwak IY; Chung-Ang University, Seoul, South Korea.; Meshcheryakov G; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Lando A; Yandex, Moscow, Russia.; Zinkevich A; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Kim BC; Chung-Ang University, Seoul, South Korea.; Lee J; Chung-Ang University, Seoul, South Korea.; Kang T; Chung-Ang University, Seoul, South Korea.; Vaishnav ED; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Sequome, Inc., South San Francisco, CA, USA.; Yadollahpour P; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Kim S; Seoul National University, Seoul, South Korea.; Albrecht J; Sage Bionetworks, Seattle, WA, USA.; Regev A; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Genentech, San Francisco, CA, USA.; Gong W; University of Minnesota, Minneapolis, MN, USA.; Kulakovskiy IV; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Meyer P; Health Care and Life Sciences, IBM Research, New York, NY, USA.; de Boer CG; University of British Columbia, Vancouver, British Columbia, Canada. carl.deboer@ubc.ca.

Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

Agrawal S; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Buyan A; Autosome.org, Russia.; FANTOM Consortium, Dolgoprudny, Russia.; Severin J; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Koido M; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Institute of Medical Science, The University of Tokyo, Tokyo, Japan.; Alam T; College of Science and Engineering, Hamad Bin Khalifa University, Doha, Qatar.; Abugessaisa I; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Chang HY; Center for Personal Dynamic Regulome, Stanford University, Stanford, California, United States of America.; Dostie J; Department of Biochemistry, Rosalind and Morris Goodman Cancer Research Center, McGill University, Montréal, Québec, Canada.; Itoh M; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; RIKEN Preventive Medicine and Diagnosis Innovation Program, Wako, Japan.; Kere J; Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.; Stem Cells and Metabolism Research Program, University of Helsinki and Folkhälsan Research Center, Helsinki, Finland.; Kondo N; RIKEN Center for Life Science Technologies, Yokohama, Japan.; Li Y; Division of Biostatistics, Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada.; Makeev VJ; FANTOM Consortium, Dolgoprudny, Russia.; Mendez M; Department of Computer Science, University of Toronto, Toronto, Ontario, Canada.; Okazaki Y; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Ramilowski JA; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Advanced Medical Research Center, Yokohama City University, Yokohama, Japan.; Sigorskikh AI; FANTOM Consortium, Dolgoprudny, Russia.; Strug LJ; Division of Biostatistics, Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada.; Department of Computer Science, University of Toronto, Toronto, Ontario, Canada.; Department of Statistical Sciences, University of Toronto, Ontario, Canada.; The Centre for Applied Genomics and Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, Ontario, Canada.; Yagi K; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Yasuzawa K; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Yip CW; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Hon CC; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Hoffman MM; Department of Computer Science, University of Toronto, Toronto, Ontario, Canada.; Princess Margaret Cancer Centre, Toronto, Ontario, Canada.; Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.; Vector Institute, Toronto, Ontario, Canada.; Terao C; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Kulakovskiy IV; Autosome.org, Russia.; FANTOM Consortium, Dolgoprudny, Russia.; Kasukawa T; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Shin JW; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Genome Institute of Singapore (GIS), Agency for Science, Technology and Research (ASTAR), Singapore, Republic of Singapore.; Carninci P; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.; Human Technopole, Milan, Italy.; de Hoon MJL; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.

Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Vorontsov IE; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Eliseeva IA; Institute of Protein Research, Russian Academy of Sciences, 142290 Pushchino, Russia.; Zinkevich A; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, 119991 Moscow, Russia.; Nikonov M; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, 119991 Moscow, Russia.; Abramov S; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Altius Institute for Biomedical Sciences, 98121 Seattle, WA, USA.; Boytsov A; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Altius Institute for Biomedical Sciences, 98121 Seattle, WA, USA.; Kamenets V; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Moscow Institute of Physics and Technology, 141700 Dolgoprudny, Russia.; Institute of Biochemistry and Genetics of the Ufa Federal Research Centre of the Russian Academy of Sciences, 450054 Ufa, Russia.; Kasianova A; Skolkovo Institute of Science and Technology, 121205 Moscow, Russia.; Institute for Information Transmission Problems of the Russian Academy of Sciences, 127051 Moscow, Russia.; Kolmykov S; Department of Computational Biology, Sirius University of Science and Technology, 354340 Sirius, Krasnodar region, Russia.; Yevshin IS; Biosoft.Ru LLC, 630090 Novosibirsk, Russia.; Favorov A; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.; Medvedeva YA; Research Center of Biotechnology RAS, Russian Academy of Sciences, 119071 Moscow, Russia.; Jolma A; Donnelly Centre, University of Toronto, Toronto, Ontario M5S 3E1, Canada.; Kolpakov F; Department of Computational Biology, Sirius University of Science and Technology, 354340 Sirius, Krasnodar region, Russia.; Bioinformatics Laboratory, Federal Research Center for Information and Computational Technologies, 630090 Novosibirsk, Russia.; Makeev VJ; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Moscow Institute of Physics and Technology, 141700 Dolgoprudny, Russia.; Institute of Biochemistry and Genetics of the Ufa Federal Research Centre of the Russian Academy of Sciences, 450054 Ufa, Russia.; Kulakovskiy IV; Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia.; Institute of Protein Research, Russian Academy of Sciences, 142290 Pushchino, Russia.; Laboratory of Regulatory Genomics, Institute of Fundamental Medicine and Biology, Kazan Federal University, 420008 Kazan, Russia.

Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Agarwal V; Department of Genome Sciences, University of Washington, Seattle, WA, USA. vikram.agarwal@sanofi.com.; mRNA Center of Excellence, Sanofi, Waltham, MA, USA. vikram.agarwal@sanofi.com.; Inoue F; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, CA, USA.; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, Japan.; Schubach M; Berlin Institute of Health at Charité-Universitätsmedizin Berlin, Berlin, Germany.; Penzar D; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Institute of Translational Medicine, Pirogov Russian National Research Medical University, Moscow, Russia.; Martin BK; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Dash PM; Berlin Institute of Health at Charité-Universitätsmedizin Berlin, Berlin, Germany.; Keukeleire P; Institute of Human Genetics, University Medical Center Schleswig-Holstein, University of Lübeck, Lübeck, Germany.; Zhang Z; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, Japan.; Sohota A; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, CA, USA.; Zhao J; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, CA, USA.; Georgakopoulos-Soares I; Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA.; Noble WS; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA.; Yardımcı GG; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.; Cancer Early Detection Advanced Research Center, Oregon Health and Science University, Portland, OR, USA.; Kulakovskiy IV; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia.; Kircher M; Berlin Institute of Health at Charité-Universitätsmedizin Berlin, Berlin, Germany.; Institute of Human Genetics, University Medical Center Schleswig-Holstein, University of Lübeck, Lübeck, Germany.; Shendure J; Department of Genome Sciences, University of Washington, Seattle, WA, USA. shendure@uw.edu.; Howard Hughes Medical Institute, Seattle, WA, USA. shendure@uw.edu.; Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA, USA. shendure@uw.edu.; Seattle Hub for Synthetic Biology, Seattle, Washington, USA. shendure@uw.edu.; Ahituv N; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA. nadav.ahituv@ucsf.edu.; Institute for Human Genetics, University of California, San Francisco, San Francisco, CA, USA. nadav.ahituv@ucsf.edu.

Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

Penzar D; Vavilov Institute of General Genetics, Moscow 119991, Russia.; Institute of Protein Research, Pushchino 142290, Russia.; Institute of Translational Medicine, Pirogov Russian National Research Medical University, Moscow 117997, Russia.; Nogina D; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow 119991, Russia.; Noskova E; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow 119991, Russia.; Zinkevich A; Vavilov Institute of General Genetics, Moscow 119991, Russia.; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow 119991, Russia.; Meshcheryakov G; Institute of Protein Research, Pushchino 142290, Russia.; Lando A; Yandex N.V., Moscow 119021, Russia.; Rafi AM; School of Biomedical Engineering, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.; de Boer C; School of Biomedical Engineering, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.; Kulakovskiy IV; Vavilov Institute of General Genetics, Moscow 119991, Russia.; Institute of Protein Research, Pushchino 142290, Russia.; Laboratory of Regulatory Genomics, Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan 420008, Russia.

Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Erokhin M; Group of Chromatin Biology, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.; Brown JL; Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.; Lomaev D; Group of Epigenetics, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.; Vorobyeva NE; Group of transcriptional complexes dynamics, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.; Zhang L; Institute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu, China.; Fab LV; Group of Chromatin Biology, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.; Mazina MY; Group of hormone-dependent transcription regulation, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia.; Kulakovskiy IV; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow119991, Russia.; Ziganshin RH; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia.; Schedl P; Department of Molecular Biology Princeton University, Princeton, NJ 08544, USA.; Georgiev P; Department of Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.; Sun MA; Institute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu, China.; Kassis JA; Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.; Chetverina D; Group of Epigenetics, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov Street, Moscow 119334, Russia.

Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

Khoroshkin M; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Zinkevich A; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Aristova E; Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia.; Yousefi H; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Lee SB; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Mittmann T; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Manegold K; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Penzar D; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Institute of Translational Medicine, Pirogov Russian National Research Medical University, Moscow, Russia.; Raleigh DR; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Departments of Radiation Oncology, Neurological Surgery, and Pathology, University of California, San Francisco, San Francisco, CA, USA.; Kulakovskiy IV; Institute of Protein Research, Russian Academy of Sciences, Pushchino, Russia.; Life Improvement by Future Technologies (LIFT) Center, Moscow, Russia.; Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.; Goodarzi H; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA, USA.; Department of Urology, University of California, San Francisco, San Francisco, CA, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA.; Arc Institute, Palo Alto, CA, 94304, USA.

Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE