부산대학교 도서관

J. Doornbos; Ö. Babur

ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences, Vol X-2-W2-2025, Pp 31-39 (2025)

Teurlinx, B.; Ruigrok, T.; Tamminga, F.; IJsselmuiden, J.; Bennin, K.; Babur, Ö.

LAND.TECHNIK AgEng 2023 ISBN: 9783181024270

Özkan, O.; Babur, Ö.; van den Brand, M.

In: Journal of Systems and Software. (Journal of Systems and Software, December 2025, 230)

Doornbos J; Wageningen University and Research, Information Technology, Hollandseweg 1, 6706 KN Wageningen, The Netherlands.; Babur Ö; Wageningen University and Research, Information Technology, Hollandseweg 1, 6706 KN Wageningen, The Netherlands.; Eindhoven University of Technology, Department of Mathematics and Computer Science, MetaForum, De Groene Loper 5, 5612 AZ Eindhoven, The Netherlands.

Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101654995 Publication Model: eCollection Cited Medium: Internet ISSN: 2352-3409 (Electronic) Linking ISSN: 23523409 NLM ISO Abbreviation: Data Brief Subsets: PubMed not MEDLINE

Proceedings of the 31st IEEE/ACM International Conference on Automated Software Engineering. :888-891

Kołodziejczak-Guglas, I.; Wiznerowicz, M.; Simões, R.L.S.; de Souza Santos, E.; Malta, T.M.; Demicco, E.G.; Lazcano Segura, R.N.; Ma, W.; Wang, P.; Petralia, F.; Geffen, Y.; Storrs, E.; Colaprico, A.; Ceccarelli, M.; da Veiga Leprevost, F.; Pugliese, P.; Noushmehr, H.; Nesvizhskii, A.I.; Kamińska, B.; Priebe, W.; Lubiński, J.; Zhang, B.; Lazar, A.J.; Kurzawa, P.; Mesri, M.; Robles, A.I.; Ding, L.; Francis, A.; Paulovich, A.G.; Calinawan, A.P.; Iavarone, A.; Chinnaiyan, A.M.; Wen, B.; Reva, B.; Druker, B.J.; Lindgren, C.M.; Kumar-Sinha, C.; Newton, C.J.; Huang, C.; Birger, C.; Day, C.; Mani, D.R.; Zhou, D.C.; Chan, D.W.; Fenyö, D.; Heiman, D.I.; Rykunov, D.; Huntsman, E.; Schadt, E.E.; Jaehnig, E.J.; An, E.; Rodrigues, F.M.; Aguet, F.; Getz, G.; Hostetter, G.; Omenn, G.S.; Cho, H.; Zhang, H.; Johnson, J.L.; Bavarva, J.; Ji, J.; Tan, J.; Lei, J.T.; Wang, J.M.; Ketchum, K.A.; Rodland, K.D.; Clauser, K.R.; Krug, K.; Ruggles, K.V.; Cantley, L.C.; Wang, L.-B.; Yao, L.; Katsnelson, L.; Domagalski, M.J.; Cieslik, M.P.; Thiagarajan, M.; Wyczalkowski, M.A.; Ellis, M.J.; Anurag, M.; Gillette, M.A.; Birrer, M.J.; Schnaubelt, M.; Selvan, M.E.; Terekhanova, N.V.; Edwards, N.; Tignor, N.; Babur, Ö.; Zhang, Q.; Thangudu, R.R.; Smith, R.D.; Oldroyd, R.; Hong, R.; Payne, S.H.; Gosline, S.J.C.; Savage, S.R.; Dhanasekaran, S.M.; Jewell, S.D.; Anand, S.; Satpathy, S.; Chowdhury, S.; Cao, S.; Schürer, S.; Carr, S.A.; Foltz, S.M.; Gonzalez Robles, T.J.; Liu, T.; Schraink, T.; Yaron, T.M.; Stathias, V.; Jiang, W.; Liang, W.-W.; Liu, W.; McKerrow, W.; Song, X.; Yi, X.; Zhang, X.; Geffen, Y.; Wu, Y.; Wang, Y.; Hu, Y.; Li, Y.; Song, Y.; Akiyama, Y.; Dou, Y.; Liao, Y.; Gümüş, Z.H.; Zhang, Z.; Shi, Z.

In: Cell Genomics. (Cell Genomics, 11 June 2025, 5(6))

Babur, Ö.; Cleophas, L.; Verhoeff, T.; van den Brand, M.

Proceedings of the 4th International Conference on Model-Driven Engineering and Software Development. :361-367

Thapa K; Kinali M; Pei S; Luna A; Babur Ö

Publisher: Elsevier Inc Country of Publication: United States NLM ID: 101767765 Publication Model: eCollection Cited Medium: Internet ISSN: 2666-3899 (Electronic) Linking ISSN: 26663899 NLM ISO Abbreviation: Patterns (N Y) Subsets: PubMed not MEDLINE

Thapa K; Computer Science Department, University of Massachusetts Boston, 100 Morrissey Boulevard, Boston, MA 02125, USA.; Kinali M; Computer Science Department, University of Massachusetts Boston, 100 Morrissey Boulevard, Boston, MA 02125, USA.; Pei S; Computer Science Department, University of Massachusetts Boston, 100 Morrissey Boulevard, Boston, MA 02125, USA.; Luna A; Developmental Therapeutics Branch, Center for Cancer Research, National Cancer Institute, NIH, 9000 Rockville Pike, Bathesda, MD 20892, USA.; Computational Biology Branch, National Library of Medicine, NIH, 9000 Rockville Pike, Bathesda, MD 20892, USA.; Babur Ö; Computer Science Department, University of Massachusetts Boston, 100 Morrissey Boulevard, Boston, MA 02125, USA.

Publisher: Elsevier Inc Country of Publication: United States NLM ID: 101767765 Publication Model: eCollection Cited Medium: Internet ISSN: 2666-3899 (Electronic) Linking ISSN: 26663899 NLM ISO Abbreviation: Patterns (N Y) Subsets: PubMed not MEDLINE

Martins Rodrigues, F.; Terekhanova, N.V.; Li, Y.; Cao, S.; Storrs, E.P.; Govindan, A.; Wyczalkowski, M.A.; Ding, L.; Imbach, K.J.; Porta-Pardo, E.; Clauser, K.R.; Geffen, Y.; Akiyama, Y.; Maynard, M.; Krug, K.; Mani, D.R.; Carr, S.A.; Gillette, M.A.; Aguet, F.; Getz, G.; Esai Selvan, M.; Klein, R.J.; Turhan, B.; Huang, K.-L.; Gümüş, Z.H.; Mendizabal, I.; Gaite-Reguero, A.; Marigorta, U.M.; Yaron, T.M.; Gonda, O.S.; Bailey, M.H.; Kawaler, E.A.; Leprevost, F.D.V.; Nesvizhskii, A.I.; Kumar-Sinha, C.; Fenyö, D.; Colaprico, A.; Iavarone, A.; Robles, A.I.; Lazar, A.J.; Cantley, L.C.; An, E.; Anurag, M.; Bavarva, J.; Birger, C.; Birrer, M.J.; Calinawan, A.P.; Ceccarelli, M.; Chan, D.W.; Chinnaiyan, A.M.; Cho, H.; Chowdhury, S.; Cieslik, M.P.; Zhou, D.C.; Day, C.; Domagalski, M.J.; Dou, Y.; Druker, B.J.; Edwards, N.; Ellis, M.J.; Foltz, S.M.; Francis, A.; Gonzalez Robles, T.J.; Gosline, S.J.C.; Hong, R.; Hostetter, G.; Hu, Y.; Hiltke, T.; Huang, C.; Huntsman, E.; Jaehnig, E.J.; Jewell, S.D.; Ji, J.; Jiang, W.; Katsnelson, L.; Ketchum, K.A.; Kolodziejczak, I.; Lei, J.T.; Liao, Y.; Lindgren, C.M.; Liu, T.; Ma, W.; McKerrow, W.; Newton, C.J.; Oldroyd, R.; Omenn, G.S.; Paulovich, A.G.; Petralia, F.; Reva, B.; Rodland, K.D.; Rodriguez, H.; Ruggles, K.V.; Rykunov, D.; Savage, S.R.; Schadt, E.E.; Schnaubelt, M.; Schraink, T.; Shi, Z.; Smith, R.D.; Song, X.; Song, Y.; Tan, J.; Thangudu, R.R.; Tignor, N.; Wang, J.M.; Wang, P.; Wang, Y.; Wen, B.; Wiznerowicz, M.; Yi, X.; Zhang, B.; Zhang, H.; Zhang, X.; Zhang, Z.; Heiman, D.I.; Johnson, J.L.; Wang, L.-B.; Yao, L.; Thiagarajan, M.; Mesri, M.; Babur, Ö.; Pugliese, P.; Zhang, Q.; Payne, S.H.; Dhanasekaran, S.M.; Anand, S.; Satpathy, S.; Schürer, S.; Stathias, V.; Liang, W.-W.; Liu, W.; Wu, Y.

In: Cell. (Cell, 1 May 2025, 188(9):2312-2335.e26)

Somers J; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.; Fenner M; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.; Kong G; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.; Division of Oncological Sciences, Oregon Health and Science University, Portland, Oregon, USA.; Thirumalaisamy D; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.; Yashar WM; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.; Division of Oncological Sciences, Oregon Health and Science University, Portland, Oregon, USA.; Thapa K; Computer Science Department, University of Massachusetts Boston, College of Science and Mathematics, Boston, Massachusetts, USA.; Kinali M; Computer Science Department, University of Massachusetts Boston, College of Science and Mathematics, Boston, Massachusetts, USA.; Nikolova O; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.; Division of Oncological Sciences, Oregon Health and Science University, Portland, Oregon, USA.; Babur Ö; Computer Science Department, University of Massachusetts Boston, College of Science and Mathematics, Boston, Massachusetts, USA.; Demir E; Department of Biomedical Engineering, Oregon Health and Science University, Portland, Oregon, USA.

Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101092707 Publication Model: Print Cited Medium: Internet ISSN: 1615-9861 (Electronic) Linking ISSN: 16159853 NLM ISO Abbreviation: Proteomics Subsets: MEDLINE

Saeedi Nikoo, M.; Kochanthara, S.; Babur, Ö.; van den Brand, M.

In: Empirical Software Engineering. (Empirical Software Engineering, March 2025, 30(2))

Babur Ö.; Demir, E.; Gönen, M.; Sander, C.; Dogrusoz, U.

Nucleic Acids Res
Nucleic Acids Research

Doornbos, J.; Babur, Ö.; Valente, J.

In: Remote Sensing. (Remote Sensing, February 2025, 17(3))

Bozyigit, F.; Bardakci, T.; Khalilipour, A.; Challenger, M.; Ramackers, G.; Babur, Ö.; Chaudron, M.R.V.

In: Software and Systems Modeling. (Software and Systems Modeling, December 2024, 23(6):1493-1511)

Portier I; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA; Department of Emergency Medicine Washington University School, St. Louis, Missouri, USA.; Manne BK; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA.; Kosaka Y; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA.; Tolley ND; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA.; Denorme F; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA; Department of Emergency Medicine Washington University School, St. Louis, Missouri, USA; Division of Vascular Neurology, Department of Neurology, University of Utah, Salt Lake City, Utah, USA.; Babur Ö; Department of Computer Science, University of Massachusetts Boston, Boston, Massachusetts, USA.; Reddy AP; Proteomics Shared Resource, Oregon Health & Science University, Portland, Oregon, USA.; Wilmarth PA; Proteomics Shared Resource, Oregon Health & Science University, Portland, Oregon, USA.; Aslan JE; Knight Cardiovascular Institute, Oregon Health & Science University, Portland, Oregon, USA.; Weyrich AS; Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, USA.; Rondina MT; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA; Division of Microbiology and Immunology, Department of Pathology, University of Utah, Salt Lake City, Utah, USA; Division of Hematology and Hematologic Malignancies, Department of Internal Medicine, University of Utah, Salt Lake City, Utah, USA; George E. Wahlen VAMC Department of Internal Medicine and the Geriatric Research, Education and Clinical Center, Salt Lake City, Utah, USA.; Campbell RA; University of Utah Molecular Medicine Program, Salt Lake City, Utah, USA; Department of Emergency Medicine Washington University School, St. Louis, Missouri, USA; Division of Microbiology and Immunology, Department of Pathology, University of Utah, Salt Lake City, Utah, USA; Division of Hematology and Hematologic Malignancies, Department of Internal Medicine, University of Utah, Salt Lake City, Utah, USA. Electronic address: campbell.r@wustl.edu.

Publisher: Elsevier Country of Publication: England NLM ID: 101170508 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1538-7836 (Electronic) Linking ISSN: 15387836 NLM ISO Abbreviation: J Thromb Haemost Subsets: MEDLINE

Güler, E.; Düz, Ö. Arıcı; Güler, G. Babur; Demir, G.G.; Akçevin, A.; Kılıçaslan, F.

JACC: Clinical Electrophysiology. 3(10):S10-S11

Guresci, E.; Tekinerdogan, B.; Babur, Ö.; Liu, Q.

In: Land. (Land, November 2024, 13(11))

Geffen Y; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA; Cancer Center and Department of Pathology, Massachusetts General Hospital, Boston, MA 02115, USA.; Anand S; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Akiyama Y; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Yaron TM; Weill Cornell Medical College, Meyer Cancer Center, New York, NY 10021, USA.; Song Y; Washington University School of Medicine, St. Louis, MO 63110, USA.; Johnson JL; Weill Cornell Medical College, Meyer Cancer Center, New York, NY 10021, USA.; Govindan A; Washington University School of Medicine, St. Louis, MO 63110, USA.; Babur Ö; Department of Computer Science, University of Massachusetts Boston, Boston, MA 02125, USA.; Li Y; Washington University School of Medicine, St. Louis, MO 63110, USA.; Huntsman E; Weill Cornell Medical College, Meyer Cancer Center, New York, NY 10021, USA.; Wang LB; Washington University School of Medicine, St. Louis, MO 63110, USA.; Birger C; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Heiman DI; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Zhang Q; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Miller M; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Maruvka YE; Biotechnology and Food Engineering, Lokey Center for Life Science and Engineering, Technion, Israel Institute of Technology, Haifa, Israel.; Haradhvala NJ; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Calinawan A; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Belkin S; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Kerelsky A; Weill Cornell Medical College, Meyer Cancer Center, New York, NY 10021, USA.; Clauser KR; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Krug K; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Satpathy S; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Payne SH; Department of Biology, Brigham Young University, Provo, UT 84602, USA.; Mani DR; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Gillette MA; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA; Harvard Medical School, Boston, MA 02115, USA.; Dhanasekaran SM; Department of Pathology, University of Michigan, Ann Arbor, MI 48109, USA.; Thiagarajan M; Leidos Biomedical Research Inc., Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.; Mesri M; Office of Cancer Clinical Proteomics Research, National Cancer Institute, Rockville, MD 20850, USA.; Rodriguez H; Office of Cancer Clinical Proteomics Research, National Cancer Institute, Rockville, MD 20850, USA.; Robles AI; Office of Cancer Clinical Proteomics Research, National Cancer Institute, Rockville, MD 20850, USA.; Carr SA; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA.; Lazar AJ; Departments of Pathology & Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.; Aguet F; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA. Electronic address: faguet@illumina.com.; Cantley LC; Weill Cornell Medical College, Meyer Cancer Center, New York, NY 10021, USA. Electronic address: lewis_cantley@dfci.harvard.edu.; Ding L; Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: lding@wustl.edu.; Getz G; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142, USA; Cancer Center and Department of Pathology, Massachusetts General Hospital, Boston, MA 02115, USA; Harvard Medical School, Boston, MA 02115, USA. Electronic address: gadgetz@broadinstitute.org.

Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE