학술논문

Neuron-specific signatures in the chromosomal connectome associated with schizophrenia risk
Document Type
article
Source
Science. 362(6420)
Subject
Human Genome
Prevention
Brain Disorders
Neurosciences
Schizophrenia
Stem Cell Research
Genetics
Mental Health
Underpinning research
2.1 Biological and endogenous factors
Aetiology
1.1 Normal biological development and functioning
Neurological
Mental health
Brain
Cells
Cultured
Chromatin
Chromatin Assembly and Disassembly
Chromosomes
Human
Connectome
Epigenesis
Genetic
Gene Expression Regulation
Developmental
Genetic Predisposition to Disease
Genome
Human
Genome-Wide Association Study
Humans
Male
Neural Stem Cells
Neurogenesis
Neuroglia
Neurons
Nucleic Acid Conformation
Protein Interaction Maps
Proteomics
Risk
Transcription
Genetic
Transcriptome
General Science & Technology
Language
Abstract
To explore the developmental reorganization of the three-dimensional genome of the brain in the context of neuropsychiatric disease, we monitored chromosomal conformations in differentiating neural progenitor cells. Neuronal and glial differentiation was associated with widespread developmental remodeling of the chromosomal contact map and included interactions anchored in common variant sequences that confer heritable risk for schizophrenia. We describe cell type-specific chromosomal connectomes composed of schizophrenia risk variants and their distal targets, which altogether show enrichment for genes that regulate neuronal connectivity and chromatin remodeling, and evidence for coordinated transcriptional regulation and proteomic interaction of the participating genes. Developmentally regulated chromosomal conformation changes at schizophrenia-relevant sequences disproportionally occurred in neurons, highlighting the existence of cell type-specific disease risk vulnerabilities in spatial genome organization.