학술논문

Bi-allelic Variants in TONSL Cause SPONASTRIME Dysplasia and a Spectrum of Skeletal Dysplasia Phenotypes
Document Type
article
Author
Burrage, Lindsay CReynolds, John JBaratang, Nissan VidaPhillips, Jennifer BWegner, JeremyMcFarquhar, AshleyHiggs, Martin RChristiansen, Audrey ELanza, Denise GSeavitt, John RJain, MahimLi, XiaohuiParry, David ARaman, VandanaChitayat, DavidChinn, Ivan KBertuch, Alison AKaraviti, LefkotheaSchlesinger, Alan EEarl, DawnBamshad, MichaelSavarirayan, RaviDoddapaneni, HarshaMuzny, DonnaJhangiani, Shalini NEng, Christine MGibbs, Richard ABi, WeiminEmrick, LisaRosenfeld, Jill APostlethwait, JohnWesterfield, MonteDickinson, Mary EBeaudet, Arthur LRanza, EmmanuelleHuber, CelineCormier-Daire, ValérieShen, WeiMao, RongHeaney, Jason DOrange, Jordan SGenomics, University of Washington Center for MendelianNetwork, Undiagnosed DiseasesAdams, David RAday, AaronAlejandro, Mercedes EAllard, PatrickAshley, Euan AAzamian, Mahshid SBacino, Carlos ABaker, EvaBalasubramanyam, AshokBarseghyan, HaykBatzli, Gabriel FBeggs, Alan HBehnam, BabakBellen, Hugo JBernstein, Jonathan ABerry, Gerard TBican, AnnaBick, David PBirch, Camille LBonner, DevonBoone, Braden EBostwick, Bret LBriere, Lauren CBrokamp, EllyBrown, Donna MBrush, MatthewBurke, Elizabeth AButte, Manish JChen, ShanClark, Gary DCoakley, Terra RCogan, Joy DColley, Heather ACooper, Cynthia MCope, HeidiCraigen, William JD’Souza, PrecillaDavids, MariskaDavidson, Jean MDayal, Jyoti GDell’Angelica, Esteban CDhar, Shweta UDipple, Katrina MDonnell-Fink, Laurel ADorrani, NaghmehDorset, Daniel CDouine, Emilie DDraper, David DDries, Annika MDuncan, LauraEckstein, David JEmrick, Lisa TEnns, Gregory MEskin, AsciaEsteves, Cecilia
Source
American Journal of Human Genetics. 104(3)
Subject
Biological Sciences
Biomedical and Clinical Sciences
Genetics
Rare Diseases
Clinical Research
Congenital Structural Anomalies
Pediatric
Aetiology
2.1 Biological and endogenous factors
Adolescent
Adult
Alleles
Animals
Cells
Cultured
Child
Child
Preschool
Chromosomal Instability
DNA Damage
Female
Fibroblasts
Genetic Association Studies
Genetic Variation
Humans
Mice
Mice
Knockout
Musculoskeletal Abnormalities
NF-kappa B
Osteochondrodysplasias
Exome Sequencing
Young Adult
Zebrafish
University of Washington Center for Mendelian Genomics
Undiagnosed Diseases Network
DNA repair
DNA replication
SPONASTRIME dysplasia
TONSL
exome sequencing
skeletal dysplasia
Medical and Health Sciences
Genetics & Heredity
Biological sciences
Biomedical and clinical sciences
Health sciences
Language
Abstract
SPONASTRIME dysplasia is an autosomal-recessive spondyloepimetaphyseal dysplasia characterized by spine (spondylar) abnormalities, midface hypoplasia with a depressed nasal bridge, metaphyseal striations, and disproportionate short stature. Scoliosis, coxa vara, childhood cataracts, short dental roots, and hypogammaglobulinemia have also been reported in this disorder. Although an autosomal-recessive inheritance pattern has been hypothesized, pathogenic variants in a specific gene have not been discovered in individuals with SPONASTRIME dysplasia. Here, we identified bi-allelic variants in TONSL, which encodes the Tonsoku-like DNA repair protein, in nine subjects (from eight families) with SPONASTRIME dysplasia, and four subjects (from three families) with short stature of varied severity and spondylometaphyseal dysplasia with or without immunologic and hematologic abnormalities, but no definitive metaphyseal striations at diagnosis. The finding of early embryonic lethality in a Tonsl-/- murine model and the discovery of reduced length, spinal abnormalities, reduced numbers of neutrophils, and early lethality in a tonsl-/- zebrafish model both support the hypomorphic nature of the identified TONSL variants. Moreover, functional studies revealed increased amounts of spontaneous replication fork stalling and chromosomal aberrations, as well as fewer camptothecin (CPT)-induced RAD51 foci in subject-derived cell lines. Importantly, these cellular defects were rescued upon re-expression of wild-type (WT) TONSL; this rescue is consistent with the hypothesis that hypomorphic TONSL variants are pathogenic. Overall, our studies in humans, mice, zebrafish, and subject-derived cell lines confirm that pathogenic variants in TONSL impair DNA replication and homologous recombination-dependent repair processes, and they lead to a spectrum of skeletal dysplasia phenotypes with numerous extra-skeletal manifestations.