학술논문

Human exposure to trichloroethylene is associated with increased variability of blood DNA methylation that is enriched in genes and pathways related to autoimmune disease and cancer
Document Type
article
Source
Epigenetics. 14(11)
Subject
Biological Sciences
Genetics
Rare Diseases
Cancer
Prevention
Biotechnology
Human Genome
2.1 Biological and endogenous factors
Aetiology
Adult
Autoantigens
Autoimmune Diseases
CpG Islands
DNA Methylation
Female
Genetic Loci
Genetic Predisposition to Disease
Genetic Variation
Humans
Male
Neoplasms
Trichloroethylene
Tripartite Motif Proteins
Ubiquitin-Protein Ligases
TCE
DNA methylation
epigenome-wide association study
epigenetics
occupational exposure
epigenetic variability
autoimmune disease
Biochemistry and Cell Biology
Medical Biochemistry and Metabolomics
Developmental Biology
Biochemistry and cell biology
Language
Abstract
Human exposure to trichloroethylene (TCE) is linked to kidney cancer, autoimmune diseases, and probably non-Hodgkin lymphoma. Additionally, TCE exposed mice and cell cultures show altered DNA methylation. To evaluate associations between TCE exposure and DNA methylation in humans, we conducted an epigenome-wide association study (EWAS) in TCE exposed workers using the HumanMethylation450 BeadChip. Across individual CpG probes, genomic regions, and globally (i.e., the 450K methylome), we investigated differences in mean DNA methylation and differences in variability of DNA methylation between 73 control (< 0.005 ppm TCE), 30 lower exposed (< 10 ppm TCE), and 37 higher exposed ( ≥ 10 ppm TCE) subjects' white blood cells. We found that TCE exposure increased methylation variation globally (Kruskal-Wallis p-value = 3.75e-3) and in 25 CpG sites at a genome-wide significance level (Bonferroni p-value < 0.05). We identified a 609 basepair region in the TRIM68 gene promoter that exhibited hypomethylation with increased exposure to TCE (FWER = 1.20e-2). Also, genes that matched to differentially variable CpGs were enriched in the 'focal adhesion' biological pathway (p-value = 2.80e-2). All in all, human exposure to TCE was associated with epigenetic alterations in genes involved in cell-matrix adhesions and interferon subtype expression, which are important in the development of autoimmune diseases; and in genes related to cancer development. These results suggest that DNA methylation may play a role in the pathogenesis of TCE exposure-related diseases and that TCE exposure may contribute to epigenetic drift.