학술논문

A diagnostic ceiling for exome sequencing in cerebellar ataxia and related neurological disorders
Document Type
article
Source
Human Mutation. 41(2)
Subject
Biological Sciences
Biomedical and Clinical Sciences
Genetics
Brain Disorders
Human Genome
Neurosciences
4.1 Discovery and preclinical testing of markers and technologies
Detection
screening and diagnosis
Neurological
Cerebellar Ataxia
DNA Copy Number Variations
Exome
Genetic Association Studies
Genetic Linkage
Genetic Predisposition to Disease
Humans
Microsatellite Repeats
Nervous System Diseases
Exome Sequencing
ataxia
cerebellar ataxia
cerebellum
diagnostic testing
exome
gait disorders
genetics
genomics
neurogenetics
spastic paraparesis
spastic paraplegia
spinocerebellar ataxia
Clinical Sciences
Genetics & Heredity
Clinical sciences
Language
Abstract
Genetic ataxias are associated with mutations in hundreds of genes with high phenotypic overlap complicating the clinical diagnosis. Whole-exome sequencing (WES) has increased the overall diagnostic rate considerably. However, the upper limit of this method remains ill-defined, hindering efforts to address the remaining diagnostic gap. To further assess the role of rare coding variation in ataxic disorders, we reanalyzed our previously published exome cohort of 76 predominantly adult and sporadic-onset patients, expanded the total number of cases to 260, and introduced analyses for copy number variation and repeat expansion in a representative subset. For new cases (n = 184), our resulting clinically relevant detection rate remained stable at 47% with 24% classified as pathogenic. Reanalysis of the previously sequenced 76 patients modestly improved the pathogenic rate by 7%. For the combined cohort (n = 260), the total observed clinical detection rate was 52% with 25% classified as pathogenic. Published studies of similar neurological phenotypes report comparable rates. This consistency across multiple cohorts suggests that, despite continued technical and analytical advancements, an approximately 50% diagnostic rate marks a relative ceiling for current WES-based methods and a more comprehensive genome-wide assessment is needed to identify the missing causative genetic etiologies for cerebellar ataxia and related neurodegenerative diseases.