학술논문

Resistome diversity in cattle and the environment decreases during beef production.
Document Type
article
Source
Subject
Feces
Animals
Cattle
Bacteria
Anti-Bacterial Agents
Longitudinal Studies
Environmental Microbiology
Drug Resistance
Bacterial
Animal Husbandry
agriculture
antimicrobial resistance
epidemiology
feedlots
global health
infectious disease
microbiology
microbiome
public health
resistome
Clinical Research
Rare Diseases
Antimicrobial Resistance
2.2 Factors relating to the physical environment
Infection
Biochemistry and Cell Biology
Language
Abstract
Antimicrobial resistant determinants (ARDs) can be transmitted from livestock systems through meat products or environmental effluents. The public health risk posed by these two routes is not well understood, particularly in non-pathogenic bacteria. We collected pooled samples from 8 groups of 1741 commercial cattle as they moved through the process of beef production from feedlot entry through slaughter. We recorded antimicrobial drug exposures and interrogated the resistome at points in production when management procedures could potentially influence ARD abundance and/or transmission. Over 300 unique ARDs were identified. Resistome diversity decreased while cattle were in the feedlot, indicating selective pressure. ARDs were not identified in beef products, suggesting that slaughter interventions may reduce the risk of transmission of ARDs to beef consumers. This report highlights the utility and limitations of metagenomics for assessing public health risks regarding antimicrobial resistance, and demonstrates that environmental pathways may represent a greater risk than the food supply.