학술논문

Data Models for an Imaging Bio-bank for Colorectal, Prostate and Gastric Cancer: the NAVIGATOR Project
Document Type
Conference
Source
2022 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI) Biomedical and Health Informatics (BHI), 2022 IEEE-EMBS International Conference on. :01-04 Sep, 2022
Subject
Bioengineering
Computing and Processing
Signal Processing and Analysis
Translational research
Navigation
Precision medicine
Biomarkers
Prediction algorithms
Oncology
Data models
entity-relationship diagram
imaging bio-banks
Language
ISSN
2641-3604
Abstract
Researchers nowadays may take advantage of broad collections of medical data to develop personalized medicine solutions. Imaging bio-banks play a fundamental role, in this regard, by serving as organized repositories of medical images associated with imaging biomarkers. In this context, the NAVIGATOR Project aims to advance colorectal, prostate, and gastric oncology translational research by leveraging quantitative imaging and multi-omics analyses. As Project's core, an imaging bio-bank is being designed and implemented in a web-accessible Virtual Research Environment (VRE). The VRE serves to extract the imaging biomarkers and further process them within prediction algorithms. In our work, we present the realization of the data models for the three cancer use-cases of the Project. First, we carried out an extensive requirements analysis to fulfill the necessities of the clinical partners involved in the Project. Then, we designed three separate data models utilizing entity-relationship diagrams. We found diagrams' modeling for colorectal and prostate cancers to be more straightforward, while gastric cancer required a higher level of complexity. Future developments of this work would include designing a common data model following the Observational Medical Outcomes Partnership Standards. Indeed, a common data model would standardize the logical infrastructure of data models and make the bio-bank easily interonerable with other bio-banks.