학술논문

On the Stability of Feature Selection in Multiomics Data
Document Type
Conference
Source
2021 International Joint Conference on Neural Networks (IJCNN) Neural Networks (IJCNN), 2021 International Joint Conference on. :1-7 Jul, 2021
Subject
Bioengineering
Computing and Processing
Robotics and Control Systems
Signal Processing and Analysis
Measurement
Systematics
Data analysis
Redundancy
Neural networks
Machine learning
Feature extraction
Feature selection
stability
clustering
multi-omics
Language
ISSN
2161-4407
Abstract
Feature selection is a prominent activity when dealing with classification/regression problems in biological and omics data. Despite the effort devoted to this issue theoretically, feature selection stability within and across methods is often overlooked in practice. This is a compelling issue because a unique or at least stable answer is needed in clinical scenarios. Here, we analyse in detail a multiomics small sample data set, the Oxford Street II data set, and discuss how existing methods perform in terms of the usual metrics but also in terms of intra and inter feature selection stability. To mitigate the observed instability, we propose a simple unsupervised feature prefiltering, achieving promising results.