학술논문

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발행년	- (예 : 2010-2015)

High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

Academic Journal

Razavi, P.; Li, B.T.; Abida, W.; Anand, A.; Santiago-Zayas, A.; Hyman, D.M.; Riely, G.J.; Scher, H.I.; Rudin, C.M.; Robson, M.E.; Diaz, L.A.; Solit, D.B.; Reis-Filho, J.S.; Brown, D.N.; Lim, R.; Ladanyi, M.; Jung, B.; Hubbell, E.; Hou, C.; Venn, O.; Maddala, T.; Gnerre, S.; Vijaya Satya, R.; Liu, Q.; Shen, L.; Eattock, N.; Yue, J.; Blocker, A.W.; Lee, M.; Sehnert, A.; Xu, H.; Hall, M.P.; Novotny, W.F.; Aravanis, A.M.; Shen, R.; Juluru, K.; De Bruijn, I.; Isbell, J.M.; Rusch, V.W.; Plitas, G.; Heerdt, A.S.; Jones, D.R.; Morrow, M.

In: Nature Medicine. (Nature Medicine, 1 December 2019, 25(12):1928-1937)

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PCA and Clustering Reveal Alternate mtDNA Phylogeny of N and M Clades.

Academic Journal

Alexe, G.; Vijaya Satya, R.; Seiler, M.; Platt, D.; Bhanot, T.; Hui, S.; Tanaka, M.; Levine, A.; Bhanot, G.

Journal of Molecular Evolution. Nov2008, Vol. 67 Issue 5, p465-487. 23p. 7 Diagrams, 2 Charts, 2 Graphs.

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Reducing amplification artifacts in high multiplex amplicon sequencing by using molecular barcodes

Academic Journal

Peng, Q.; Vijaya Satya, R.; Lewis, M.; Randad, P.; Wang, Y.

In: BMC Genomics. (BMC Genomics, August 07, 2015, 16(1))

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A new strategy to reduce allelic bias in RNA-Seq readmapping

Academic Journal

Vijaya Satya, R.; Zavaljevski, N.; Reifman, J.

In: Nucleic Acids Research. (Nucleic Acids Research, September 2012, 40(16):e127)

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Thermodynamic basis for the emergence of genomes during prebiotic evolution

Academic Journal

Woo, H.-J.; Vijaya Satya, R.; Reifman, J.

In: PLoS Computational Biology. (PLoS Computational Biology, May 2012, 8(5))

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SNIT: SNP identification for strain typing

Academic Journal

Vijaya Satya, R.; Zavaljevski, N.; Reifman, J.

In: Source Code for Biology and Medicine. (Source Code for Biology and Medicine, 8 September 2011, 6)

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Accelerating biomedical research in designing diagnostic assays, drugs, and vaccines

Academic Journal

Wallqvist, A.; Zavaljevski, N.; Vijaya Satya, R.; Bondugula, R.; Desai, V.; Hu, X.; Kumar, K.; Lee, M.S.; Yeh, I.-C.; Yu, C.; Reifman, J.

In: Computing in Science and Engineering. (Computing in Science and Engineering, September 2010, 12(5):46-55)

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A high-throughput pipeline for the design of real-time PCR signatures

Academic Journal

Vijaya Satya, R.; Kumar, K.; Zavaljevski, N.; Reifman, J.

In: BMC Bioinformatics. (BMC Bioinformatics, 23 June 2010, 11)

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A high-throughput pipeline for designing microarray-based pathogen diagnostic assays

Academic Journal

Vijaya Satya, R.; Zavaljevski, N.; Kumar, K.; Reifman, J.

In: BMC Bioinformatics. (BMC Bioinformatics, 10 April 2008, 9)

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