학술논문

Landscape of global urban environmental resistome and its association with local socioeconomic and medical status
Document Type
Original Paper
Source
Science China Life Sciences. 67(6):1292-1301
Subject
urban environment
metagenome
antibiotic resistance
resistance diversity
biosynthetic gene clusters
Language
English
ISSN
1674-7305
1869-1889
Abstract
Antimicrobial resistance (AMR) poses a critical threat to global health and development, with environmental factors—particularly in urban areas—contributing significantly to the spread of antibiotic resistance genes (ARGs). However, most research to date has been conducted at a local level, leaving significant gaps in our understanding of the global status of antibiotic resistance in urban environments. To address this issue, we thoroughly analyzed a total of 86,213 ARGs detected within 4,728 metagenome samples, which were collected by the MetaSUB International Consortium involving diverse urban environments in 60 cities of 27 countries, utilizing a deep-learning based methodology. Our findings demonstrated the strong geographical specificity of urban environmental resistome, and their correlation with various local socioeconomic and medical conditions. We also identified distinctive evolutionary patterns of ARG-related biosynthetic gene clusters (BGCs) across different countries, and discovered that the urban environment represents a rich source of novel antibiotics. Our study provides a comprehensive overview of the global urban environmental resistome, and fills a significant gap in our knowledge of large-scale urban antibiotic resistome analysis.