학술논문

A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies
Document Type
article
Source
Cell. 181(2)
Subject
Biochemistry and Cell Biology
Biological Sciences
Genetics
Generic health relevance
Mass Spectrometry
Plant Proteins
Plants
Protein Interaction Mapping
Protein Interaction Maps
Proteomics
co-fractionation mass spectrometry
comparative proteomics
cross-linking mass spectrometry
evolution
interaction-to-phenotype
pathogen defense
plants
protein complexes
protein interactions
Medical and Health Sciences
Developmental Biology
Biological sciences
Biomedical and clinical sciences
Language
Abstract
Plants are foundational for global ecological and economic systems, but most plant proteins remain uncharacterized. Protein interaction networks often suggest protein functions and open new avenues to characterize genes and proteins. We therefore systematically determined protein complexes from 13 plant species of scientific and agricultural importance, greatly expanding the known repertoire of stable protein complexes in plants. By using co-fractionation mass spectrometry, we recovered known complexes, confirmed complexes predicted to occur in plants, and identified previously unknown interactions conserved over 1.1 billion years of green plant evolution. Several novel complexes are involved in vernalization and pathogen defense, traits critical for agriculture. We also observed plant analogs of animal complexes with distinct molecular assemblies, including a megadalton-scale tRNA multi-synthetase complex. The resulting map offers a cross-species view of conserved, stable protein assemblies shared across plant cells and provides a mechanistic, biochemical framework for interpreting plant genetics and mutant phenotypes.