학술논문

LATE-NC risk alleles (in TMEM106B, GRN, and ABCC9 genes) among persons with African ancestry.
Document Type
article
Author
Katsumata, YurikoFardo, David WShade, Lincoln MPBowen, James DCrane, Paul KJarvik, Gail PKeene, C DirkLarson, Eric BMcCormick, Wayne CMcCurry, Susan MMukherjee, ShubhabrataKowall, Neil WMcKee, Ann CHonig, Robert ALawrence, SVonsattel, Jean PaulWilliamson, JenniferSmall, ScottBurke, James RHulette, Christine MWelsh-Bohmer, Kathleen AGearing, MarlaLah, James JLevey, Allan IWingo, Thomas SApostolova, Liana GFarlow, Martin RGhetti, BernardinoSaykin, Andrew JSpina, SalvatoreAlbert, Marilyn SLyketsos, Constantine GTroncoso, Juan CFrosch, Matthew PGreen, Robert CGrowdon, John HHyman, Bradley TTanzi, Rudolph EPotter, HuntingtonDickson, Dennis WErtekin-Taner, NiluferGraff-Radford, Neill RParisi, Joseph EPetersen, Ronald CDuara, RanjanBuxbaum, Joseph DGoate, Alison MSano, MaryMasurkar, Arjun VWisniewski, ThomasBigio, Eileen HMesulam, MarselWeintraub, SandraVassar, RobertKaye, Jeffrey AQuinn, Joseph FWoltjer, Randall LBarnes, Lisa LBennett, David ASchneider, Julie AYu, LeiHenderson, VictorFallon, Kenneth BHarrell, Lindy EMarson, Daniel CRoberson, Erik DDeCarli, CharlesJin, Lee-WayOlichney, John MKim, RonaldLaFerla, Frank MMonuki, EdwinHead, ElizabethSultzer, DavidGeschwind, Daniel HVinters, Harry VChesselet, Marie-FrancoiseGalasko, Douglas RBrewer, James BBoxer, AdamKarydas, AnnaKramer, Joel HMiller, Bruce LRosen, Howard JSeeley, William WBurns, Jeffrey MSwerdlow, Russell HAbner, ErinVan Eldik, Linda JAlbin, Roger LLieberman, Andrew PPaulson, Henry LArnold, Steven ETrojanowski, John QVan Deerlin, Vivianna MHamilton, Ronald LKamboh, M IlyasLopez, Oscar LBecker, James T
Source
Journal of Neuropathology & Experimental Neurology. 82(9)
Subject
Biomedical and Clinical Sciences
Neurosciences
Clinical Sciences
Genetics
Clinical Research
Neurodegenerative
Aging
Human Genome
Acquired Cognitive Impairment
Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD)
Dementia
Brain Disorders
Alzheimer's Disease
2.1 Biological and endogenous factors
Aetiology
Humans
Alleles
Polymorphism
Single Nucleotide
Alzheimer Disease
TDP-43 Proteinopathies
Progranulins
Membrane Proteins
Nerve Tissue Proteins
Sulfonylurea Receptors
Alzheimer’s Disease Genetics Consortium
KCNMB2
Diversity
Epidemiology
FTLD
Genome-Wide Association Studies
KATP
Neurology & Neurosurgery
Clinical sciences
Language
Abstract
Limbic-predominant age-related TDP-43 encephalopathy (LATE) affects approximately one-third of older individuals and is associated with cognitive impairment. However, there is a highly incomplete understanding of the genetic determinants of LATE neuropathologic changes (LATE-NC) in diverse populations. The defining neuropathologic feature of LATE-NC is TDP-43 proteinopathy, often with comorbid hippocampal sclerosis (HS). In terms of genetic risk factors, LATE-NC and/or HS are associated with single nucleotide variants (SNVs) in 3 genes-TMEM106B (rs1990622), GRN (rs5848), and ABCC9 (rs1914361 and rs701478). We evaluated these 3 genes in convenience samples of individuals of African ancestry. The allele frequencies of the LATE-associated alleles were significantly different between persons of primarily African (versus European) ancestry: In persons of African ancestry, the risk-associated alleles for TMEM106B and ABCC9 were less frequent, whereas the risk allele in GRN was more frequent. We performed an exploratory analysis of data from African-American subjects processed by the Alzheimer's Disease Genomics Consortium, with a subset of African-American participants (n = 166) having corroborating neuropathologic data through the National Alzheimer's Coordinating Center (NACC). In this limited-size sample, the ABCC9/rs1914361 SNV was associated with HS pathology. More work is required concerning the genetic factors influencing non-Alzheimer disease pathology such as LATE-NC in diverse cohorts.