학술논문

Missense Variants in the Histone Acetyltransferase Complex Component Gene TRRAP Cause Autism and Syndromic Intellectual Disability.
Document Type
article
Author
Cogné, BenjaminEhresmann, SophieBeauregard-Lacroix, ElianeRousseau, JustineBesnard, ThomasGarcia, ThomasPetrovski, SlavéAvni, ShiriMcWalter, KirstyBlackburn, Patrick RSanders, Stephan JUguen, KévinHarris, JacquelineCohen, Julie SBlyth, MoiraLehman, AnnaBerg, JonathanLi, Mindy HKini, UshaJoss, Shelaghvon der Lippe, CharlotteGordon, Christopher THumberson, Jennifer BRobak, LaurieScott, Daryl ASutton, Vernon RSkraban, Cara MJohnston, Jennifer JPoduri, AnnapurnaNordenskjöld, MagnusShashi, VandanaGerkes, Erica HBongers, Ernie MHFGilissen, ChristianZarate, Yuri AKvarnung, MalinLally, Kevin PKulch, Peggy ADaniels, BrinaHernandez-Garcia, AndresStong, NicholasMcGaughran, JulieRetterer, KyleTveten, KristianSullivan, JenniferGeisheker, Madeleine RStray-Pedersen, AsbjorgTarpinian, Jennifer MKlee, Eric WSapp, Julie CZyskind, JacobHolla, Øystein LBedoukian, EmmaFilippini, FrancescaGuimier, AnnePicard, ArnaudBusk, Øyvind LPunetha, JayaPfundt, RolphLindstrand, AnnaNordgren, AnnKalb, FaythDesai, MeghaEbanks, Ashley HarmonJhangiani, Shalini NDewan, TammieCoban Akdemir, Zeynep HTelegrafi, AidaZackai, Elaine HBegtrup, AmberSong, XiaofeiToutain, AnnickWentzensen, Ingrid MOdent, SylvieBonneau, DominiqueLatypova, XéniaDeb, WallidCAUSES StudyRedon, SylviaBilan, FrédéricLegendre, MarineTroyer, CaitlinWhitlock, KerriCaluseriu, OanaMurphree, Marine IPichurin, Pavel NAgre, KatherineGavrilova, RalitzaRinne, TuulaPark, MeredithShain, CatherineHeinzen, Erin LXiao, RuiAmiel, JeanneLyonnet, StanislasIsidor, BertrandBiesecker, Leslie GLowenstein, DanPosey, Jennifer EDenommé-Pichon, Anne-Sophie
Source
American journal of human genetics. 104(3)
Subject
CAUSES Study
Deciphering Developmental Disorders study
Humans
Syndrome
Adaptor Proteins
Signal Transducing
Nuclear Proteins
Prognosis
Autistic Disorder
Amino Acid Sequence
Sequence Homology
Mutation
Missense
Adolescent
Adult
Child
Child
Preschool
Infant
Female
Male
Young Adult
Genetic Association Studies
Intellectual Disability
TRRAP
autism spectrum disorder
congenital malformations
de novo variants
histone acetylation
intellectual disability
neurodevelopmental disorders
Intellectual and Developmental Disabilities (IDD)
Pediatric
Genetics
Brain Disorders
Neurosciences
Mental Health
Autism
Rare Diseases
2.1 Biological and endogenous factors
Aetiology
Mental health
Biological Sciences
Medical and Health Sciences
Genetics & Heredity
Language
Abstract
Acetylation of the lysine residues in histones and other DNA-binding proteins plays a major role in regulation of eukaryotic gene expression. This process is controlled by histone acetyltransferases (HATs/KATs) found in multiprotein complexes that are recruited to chromatin by the scaffolding subunit transformation/transcription domain-associated protein (TRRAP). TRRAP is evolutionarily conserved and is among the top five genes intolerant to missense variation. Through an international collaboration, 17 distinct de novo or apparently de novo variants were identified in TRRAP in 24 individuals. A strong genotype-phenotype correlation was observed with two distinct clinical spectra. The first is a complex, multi-systemic syndrome associated with various malformations of the brain, heart, kidneys, and genitourinary system and characterized by a wide range of intellectual functioning; a number of affected individuals have intellectual disability (ID) and markedly impaired basic life functions. Individuals with this phenotype had missense variants clustering around the c.3127G>A p.(Ala1043Thr) variant identified in five individuals. The second spectrum manifested with autism spectrum disorder (ASD) and/or ID and epilepsy. Facial dysmorphism was seen in both groups and included upslanted palpebral fissures, epicanthus, telecanthus, a wide nasal bridge and ridge, a broad and smooth philtrum, and a thin upper lip. RNA sequencing analysis of skin fibroblasts derived from affected individuals skin fibroblasts showed significant changes in the expression of several genes implicated in neuronal function and ion transport. Thus, we describe here the clinical spectrum associated with TRRAP pathogenic missense variants, and we suggest a genotype-phenotype correlation useful for clinical evaluation of the pathogenicity of the variants.