학술논문

Characterisation of Mycobacterium tuberculosis isolates lacking IS6110 in Viet Nam
Document Type
article
Source
The International Journal of Tuberculosis and Lung Disease. 17(11)
Subject
Biomedical and Clinical Sciences
Clinical Sciences
Clinical Research
Infectious Diseases
Rare Diseases
Tuberculosis
Antimicrobial Resistance
Infection
Good Health and Well Being
Adolescent
Adult
Aged
Amplified Fragment Length Polymorphism Analysis
Antitubercular Agents
DNA Transposable Elements
DNA
Bacterial
Drug Resistance
Bacterial
False Negative Reactions
Female
Genotype
Humans
Male
Microbial Sensitivity Tests
Middle Aged
Minisatellite Repeats
Molecular Diagnostic Techniques
Mycobacterium tuberculosis
Phenotype
Polymorphism
Restriction Fragment Length
Predictive Value of Tests
Prospective Studies
Rural Health
Sputum
Tuberculosis
Pulmonary
Vietnam
Young Adult
Emerging Infectious Diseases
Vaccine Related
Genetics
Evaluation of treatments and therapeutic interventions
6.1 Pharmaceuticals
4.2 Evaluation of markers and technologies
Detection
screening and diagnosis
Bacterial Proteins
Drug Resistance
Multiple
Bacterial
Laboratories
Mutation
Tuberculosis
Multidrug-Resistant
extensively drug-resistant tuberculosis
drug susceptibility
isoniazid
rifampin
fluoroquinolone
kanamycin
capreomycin
amikacin
lateral-flow cell
tuberculosis
Cardiorespiratory Medicine and Haematology
Microbiology
Cardiovascular medicine and haematology
Clinical sciences
Epidemiology
Language
Abstract
Despite the WHO's call for universal drug susceptibility testing for all patients being evaluated for tuberculosis (TB), a lack of rapid diagnostic tests which can fully describe TB resistance patterns is a major challenge in ensuring that all persons diagnosed with drug-resistant TB are started on an appropriate treatment regime. We evaluated the accuracy of the Akonni Biosystems XDR-TB TruArray and lateral-flow cell (XDR-LFC), a novel multiplex assay to simultaneously detect mutations across seven genes that confer resistance to both first- and second-line anti-TB drugs. The XDR-LFC includes 271 discrete three-dimensional gel elements with target-specific probes for identifying mutations in katG, inhA promoter, and ahpC promoter (isoniazid), rpoB (rifampin), gyrA (fluoroquinolones), rrs and eis promoter (kanamycin), and rrs (capreomycin and amikacin). We evaluated XDR-LFC performance with 87 phenotypically and genotypically characterized clinical Mycobacterium tuberculosis isolates. The overall assay levels of accuracy for mutation detection in specific genes were 98.6% for eis promoter and 100.0% for the genes katG, inhA promoter, ahpC promoter, rpoB, gyrA, and rrs The sensitivity and specificity against phenotypic reference were 100% and 100% for isoniazid, 98.4% and 50% for rifampin (specificity increased to 100% once the strains with documented low-level resistance mutations in rpoB were excluded), 96.2% and 100% for fluoroquinolones, 92.6% and 100% for kanamycin, 93.9% and 97.4% for capreomycin, and 80% and 100% for amikacin. The XDR-LFC solution appears to be a promising new tool for accurate detection of resistance to both first- and second-line anti-TB drugs.