학술논문

Chromatin establishes an immature version of neuronal protocadherin selection during the naive-to-primed conversion of pluripotent stem cells
Document Type
article
Source
Nature Genetics. 51(12)
Subject
Biological Sciences
Genetics
Pediatric
Stem Cell Research - Nonembryonic - Non-Human
Stem Cell Research - Nonembryonic - Human
Stem Cell Research - Induced Pluripotent Stem Cell
Stem Cell Research
Stem Cell Research - Induced Pluripotent Stem Cell - Human
Stem Cell Research - Embryonic - Human
Neurosciences
1.1 Normal biological development and functioning
Underpinning research
Neurological
Adult
Animals
Astrocytes
Brain
Cadherins
Cell Differentiation
Cell Line
Chromatin
Down Syndrome
Gene Expression Regulation
Histones
Humans
Induced Pluripotent Stem Cells
Mice
Middle Aged
Neurons
Promoter Regions
Genetic
Rats
Single-Cell Analysis
Spinal Cord
Transplantation
Heterologous
Medical and Health Sciences
Developmental Biology
Agricultural biotechnology
Bioinformatics and computational biology
Language
Abstract
In the mammalian genome, the clustered protocadherin (cPCDH) locus provides a paradigm for stochastic gene expression with the potential to generate a unique cPCDH combination in every neuron. Here we report a chromatin-based mechanism that emerges during the transition from the naive to the primed states of cell pluripotency and reduces, by orders of magnitude, the combinatorial potential in the human cPCDH locus. This mechanism selectively increases the frequency of stochastic selection of a small subset of cPCDH genes after neuronal differentiation in monolayers, 10-month-old cortical organoids and engrafted cells in the spinal cords of rats. Signs of these frequent selections can be observed in the brain throughout fetal development and disappear after birth, except in conditions of delayed maturation such as Down's syndrome. We therefore propose that a pattern of limited cPCDH-gene expression diversity is maintained while human neurons still retain fetal-like levels of maturation.