학술논문

Disruption of the ASTN2/TRIM32 locus at 9q33.1 is a risk factor in males for autism spectrum disorders, ADHD and other neurodevelopmental phenotypes
Document Type
article
Author
Lionel, Anath CTammimies, KristiinaVaags, Andrea KRosenfeld, Jill AAhn, Joo WookMerico, DanieleNoor, AbdulRunke, Cassandra KPillalamarri, Vamsee KCarter, Melissa TGazzellone, Matthew JThiruvahindrapuram, BhoomaFagerberg, ChristinaLaulund, Lone WPellecchia, GiovannaLamoureux, SylviaDeshpande, CharuClayton-Smith, JillWhite, Ann CLeather, SusanTrounce, JohnBedford, H MelanieHatchwell, EliEis, Peggy SYuen, Ryan KCWalker, SusanUddin, MohammedGeraghty, Michael TNikkel, Sarah MTomiak, Eva MFernandez, Bridget ASoreni, NoamCrosbie, JenniferArnold, Paul DSchachar, Russell JRoberts, WendyPaterson, Andrew DSo, JoyceSzatmari, PeterChrysler, ChristinaWoodbury-Smith, MarcLowry, R BrianZwaigenbaum, LonnieMandyam, DivyaWei, JohnMacDonald, Jeffrey RHowe, Jennifer LNalpathamkalam, ThomasWang, ZhuozhiTolson, DanielCobb, David SWilks, Timothy MSorensen, Mark JBader, Patricia IAn, YuWu, Bai-LinMusumeci, Sebastiano AntoninoRomano, CorradoPostorivo, DianaNardone, Anna MDella Monica, MatteoScarano, GioacchinoZoccante, LeonardoNovara, FrancescaZuffardi, OrsettaCiccone, RobertoAntona, VincenzoCarella, MassimoZelante, LeopoldoCavalli, PietroPoggiani, CarloCavallari, UgoArgiropoulos, BobChernos, JudyBrasch-Andersen, CharlotteSpeevak, MarshaFichera, MarcoOgilvie, Caroline MackieShen, YipingHodge, Jennelle CTalkowski, Michael EStavropoulos, Dimitri JMarshall, Christian RScherer, Stephen W
Source
Human Molecular Genetics. 23(10)
Subject
Pediatric Research Initiative
Pediatric
Intellectual and Developmental Disabilities (IDD)
Mental Health
Brain Disorders
Human Genome
Neurosciences
Autism
Clinical Research
Behavioral and Social Science
Genetics
2.1 Biological and endogenous factors
Aetiology
Mental health
Adolescent
Adult
Attention Deficit Disorder with Hyperactivity
Case-Control Studies
Child
Child Development Disorders
Pervasive
Child
Preschool
Chromosomes
Human
Pair 9
DNA Copy Number Variations
Exons
Female
Gene Expression
Genetic Association Studies
Genetic Predisposition to Disease
Glycoproteins
Humans
Infant
Infant
Newborn
Male
Nerve Tissue Proteins
Organ Specificity
Phenotype
Polymorphism
Single Nucleotide
Protein Isoforms
Receptors
Cell Surface
Risk Factors
Sequence Deletion
Transcription Factors
Transcription Initiation Site
Tripartite Motif Proteins
Ubiquitin-Protein Ligases
Young Adult
Biological Sciences
Medical and Health Sciences
Genetics & Heredity
Language
Abstract
Rare copy number variants (CNVs) disrupting ASTN2 or both ASTN2 and TRIM32 have been reported at 9q33.1 by genome-wide studies in a few individuals with neurodevelopmental disorders (NDDs). The vertebrate-specific astrotactins, ASTN2 and its paralog ASTN1, have key roles in glial-guided neuronal migration during brain development. To determine the prevalence of astrotactin mutations and delineate their associated phenotypic spectrum, we screened ASTN2/TRIM32 and ASTN1 (1q25.2) for exonic CNVs in clinical microarray data from 89 985 individuals across 10 sites, including 64 114 NDD subjects. In this clinical dataset, we identified 46 deletions and 12 duplications affecting ASTN2. Deletions of ASTN1 were much rarer. Deletions near the 3' terminus of ASTN2, which would disrupt all transcript isoforms (a subset of these deletions also included TRIM32), were significantly enriched in the NDD subjects (P = 0.002) compared with 44 085 population-based controls. Frequent phenotypes observed in individuals with such deletions include autism spectrum disorder (ASD), attention deficit hyperactivity disorder (ADHD), speech delay, anxiety and obsessive compulsive disorder (OCD). The 3'-terminal ASTN2 deletions were significantly enriched compared with controls in males with NDDs, but not in females. Upon quantifying ASTN2 human brain RNA, we observed shorter isoforms expressed from an alternative transcription start site of recent evolutionary origin near the 3' end. Spatiotemporal expression profiling in the human brain revealed consistently high ASTN1 expression while ASTN2 expression peaked in the early embryonic neocortex and postnatal cerebellar cortex. Our findings shed new light on the role of the astrotactins in psychopathology and their interplay in human neurodevelopment.