학술논문

Concomitant diagnosis of immune deficiency and Pseudomonas sepsis in a 19 month old with ecthyma gangrenosum by host whole-genome sequencing
Document Type
article
Source
Molecular Case Studies. 4(6)
Subject
Biological Sciences
Bioinformatics and Computational Biology
Biomedical and Clinical Sciences
Genetics
Microbiology
Medical Microbiology
Infectious Diseases
Human Genome
Sepsis
Hematology
Infection
Inflammatory and immune system
Agammaglobulinaemia Tyrosine Kinase
Agammaglobulinemia
Bacteremia
Ecthyma
Gangrene
Genetic Diseases
X-Linked
Humans
Immunologic Deficiency Syndromes
Infant
Male
Pseudomonas Infections
Pseudomonas aeruginosa
Skin
Whole Genome Sequencing
congenital neutropenia
immune dysregulation
sepsis
Pharmacology and pharmaceutical sciences
Language
Abstract
X-linked agammaglobulinemia (XLA, OMIM#300300) is a rare monogenic primary immunodeficiency caused by mutations in the Bruton tyrosine kinase (BTK) gene. XLA is characterized by insufficient immunoglobulin levels and susceptibility to life-threatening bacterial infections. We report on a patient that presented with ecthyma gangrenosum and septicemia. Rapid trio whole-genome sequencing (rWGS) revealed an apparently de novo hemizygous pathogenic variant (c.726dupT; p.Ile243TyrfsTer15) in the BTK gene. Metagenomic analysis of rWGS sequences that did not align to the human genome revealed 770 aligned to the Pseudomonas aeruginosa PAO1 genome. The patient was diagnosed with XLA and pseudomonal sepsis.