학술논문

Discriminatory Power of Combinatorial Antigen Recognition in Cancer T Cell Therapies
Document Type
article
Source
Cell Systems. 11(3)
Subject
Biochemistry and Cell Biology
Biological Sciences
Cancer
Antigens
Neoplasm
Humans
Immunotherapy
Adoptive
AND gate
CAR T cell
NOT gate
T cell therapeutics
combinatorial antigen recognition
tumor antigens
tumor-versus-normal discrimination
Biochemistry and cell biology
Language
Abstract
Precise discrimination of tumor from normal tissues remains a major roadblock for therapeutic efficacy of chimeric antigen receptor (CAR) T cells. Here, we perform a comprehensive in silico screen to identify multi-antigen signatures that improve tumor discrimination by CAR T cells engineered to integrate multiple antigen inputs via Boolean logic, e.g., AND and NOT. We screen >2.5 million dual antigens and ∼60 million triple antigens across 33 tumor types and 34 normal tissues. We find that dual antigens significantly outperform the best single clinically investigated CAR targets and confirm key predictions experimentally. Further, we identify antigen triplets that are predicted to show close to ideal tumor-versus-normal tissue discrimination for several tumor types. This work demonstrates the potential of 2- to 3-antigen Boolean logic gates for improving tumor discrimination by CAR T cell therapies. Our predictions are available on an interactive web server resource (antigen.princeton.edu).