학술논문

Correcting the F508del-CFTR variant by modulating eukaryotic translation initiation factor 3–mediated translation initiation
Document Type
article
Source
Journal of Biological Chemistry. 293(35)
Subject
Biological Sciences
Bioinformatics and Computational Biology
Rare Diseases
Genetics
Lung
Human Genome
Cystic Fibrosis
1.1 Normal biological development and functioning
2.1 Biological and endogenous factors
Aetiology
Underpinning research
Generic health relevance
Cell Line
Cystic Fibrosis Transmembrane Conductance Regulator
Eukaryotic Initiation Factor-3
Humans
Mutation
Peptide Chain Initiation
Translational
Phenylalanine
Protein Folding
Protein Interaction Maps
Protein Transport
RNA Interference
RNA
Small Interfering
F508del-CFTR
cystic fibrosis
cystic fibrosis transmembrane conductance regulator
eIF3a
eukaryotic translation initiation
eukaryotic translation initiation factor 3
network hub
protein misfolding
protein translation
proteostasis
translation initiation factor
Chemical Sciences
Medical and Health Sciences
Biochemistry & Molecular Biology
Biological sciences
Biomedical and clinical sciences
Chemical sciences
Language
Abstract
Inherited and somatic rare diseases result from >200,000 genetic variants leading to loss- or gain-of-toxic function, often caused by protein misfolding. Many of these misfolded variants fail to properly interact with other proteins. Understanding the link between factors mediating the transcription, translation, and protein folding of these disease-associated variants remains a major challenge in cell biology. Herein, we utilized the cystic fibrosis transmembrane conductance regulator (CFTR) protein as a model and performed a proteomics-based high-throughput screen (HTS) to identify pathways and components affecting the folding and function of the most common cystic fibrosis-associated mutation, the F508del variant of CFTR. Using a shortest-path algorithm we developed, we mapped HTS hits to the CFTR interactome to provide functional context to the targets and identified the eukaryotic translation initiation factor 3a (eIF3a) as a central hub for the biogenesis of CFTR. Of note, siRNA-mediated silencing of eIF3a reduced the polysome-to-monosome ratio in F508del-expressing cells, which, in turn, decreased the translation of CFTR variants, leading to increased CFTR stability, trafficking, and function at the cell surface. This finding suggested that eIF3a is involved in mediating the impact of genetic variations in CFTR on the folding of this protein. We posit that the number of ribosomes on a CFTR mRNA transcript is inversely correlated with the stability of the translated polypeptide. Polysome-based translation challenges the capacity of the proteostasis environment to balance message fidelity with protein folding, leading to disease. We suggest that this deficit can be corrected through control of translation initiation.