학술논문

Further evidence for the involvement of EFL1 in a Shwachman-Diamond-like syndrome and expansion of the phenotypic features.
Document Type
article
Source
Cold Spring Harbor molecular case studies. 4(5)
Subject
Undiagnosed Diseases Network
Humans
Osteochondrodysplasias
Exocrine Pancreatic Insufficiency
Bone Marrow Diseases
Lipomatosis
GTP Phosphohydrolases
Proteins
Ribonucleoprotein
U5 Small Nuclear
Peptide Elongation Factors
Phenotype
Mutation
Adolescent
Female
Genetic Variation
Shwachman-Diamond Syndrome
Exome Sequencing
congenital thrombocytopenia
exocrine pancreatic insufficiency
hepatic bridging fibrosis
hypercalciuria
intellectual disability
mild
portal fibrosis
short stature
spondylometaphyseal dysplasia
Clinical Research
Brain Disorders
Human Genome
Genetics
Rare Diseases
Aetiology
2.1 Biological and endogenous factors
Whole Exome Sequencing
Language
Abstract
Recent evidence has implicated EFL1 in a phenotype overlapping Shwachman-Diamond syndrome (SDS), with the functional interplay between EFL1 and the previously known causative gene SBDS accounting for the similarity in clinical features. Relatively little is known about the phenotypes associated with pathogenic variants in the EFL1 gene, but the initial indication was that phenotypes may be more severe, when compared with SDS. We report a pediatric patient who presented with a metaphyseal dysplasia and was found to have biallelic variants in EFL1 on reanalysis of trio whole-exome sequencing data. The variant had not been initially reported because of the research laboratory's focus on de novo variants. Subsequent phenotyping revealed variability in her manifestations. Although her metaphyseal abnormalities were more severe than in the original reported cohort with EFL1 variants, the bone marrow abnormalities were generally mild, and there was equivocal evidence for pancreatic insufficiency. Despite the limited number of reported patients, variants in EFL1 appear to cause a broader spectrum of symptoms that overlap with those seen in SDS. Our report adds to the evidence of EFL1 being associated with an SDS-like phenotype and provides information adding to our understanding of the phenotypic variability of this disorder. Our report also highlights the value of exome data reanalysis when a diagnosis is not initially apparent.