학술논문

Unified classification of mouse retinal ganglion cells using function, morphology, and gene expression
Document Type
article
Source
Cell Reports. 40(2)
Subject
Biological Sciences
Eye Disease and Disorders of Vision
Neurosciences
Eye
Neurological
Animals
Gene Expression
Mice
Retina
Retinal Ganglion Cells
CP: Neuroscience
retina
retinal ganglion cell
transcriptomics
morphology
light responses
classification
Biochemistry and Cell Biology
Medical Physiology
Biological sciences
Language
Abstract
Classification and characterization of neuronal types are critical for understanding their function and dysfunction. Neuronal classification schemes typically rely on measurements of electrophysiological, morphological, and molecular features, but aligning such datasets has been challenging. Here, we present a unified classification of mouse retinal ganglion cells (RGCs), the sole retinal output neurons. We use visually evoked responses to classify 1,859 mouse RGCs into 42 types. We also obtain morphological or transcriptomic data from subsets and use these measurements to align the functional classification to publicly available morphological and transcriptomic datasets. We create an online database that allows users to browse or download the data and to classify RGCs from their light responses using a machine learning algorithm. This work provides a resource for studies of RGCs, their upstream circuits in the retina, and their projections in the brain, and establishes a framework for future efforts in neuronal classification and open data distribution.