학술논문

The p110 delta structure: mechanisms for selectivity and potency of new PI(3)K inhibitors.
Document Type
article
Source
Nature chemical biology. 6(2)
Subject
Cell Line
Animals
Humans
Spodoptera
Adenosine Triphosphate
Protein Kinase Inhibitors
Crystallography
X-Ray
Catalytic Domain
Structure-Activity Relationship
Substrate Specificity
Models
Molecular
Computer Simulation
Protein Interaction Domains and Motifs
Phosphatidylinositol 3-Kinases
Hydrophobic and Hydrophilic Interactions
Crystallography
X-Ray
Models
Molecular
Medicinal and Biomolecular Chemistry
Biochemistry and Cell Biology
Biochemistry & Molecular Biology
Language
Abstract
Deregulation of the phosphoinositide-3-OH kinase (PI(3)K) pathway has been implicated in numerous pathologies including cancer, diabetes, thrombosis, rheumatoid arthritis and asthma. Recently, small-molecule and ATP-competitive PI(3)K inhibitors with a wide range of selectivities have entered clinical development. In order to understand the mechanisms underlying the isoform selectivity of these inhibitors, we developed a new expression strategy that enabled us to determine to our knowledge the first crystal structure of the catalytic subunit of the class IA PI(3)K p110 delta. Structures of this enzyme in complex with a broad panel of isoform- and pan-selective class I PI(3)K inhibitors reveal that selectivity toward p110 delta can be achieved by exploiting its conformational flexibility and the sequence diversity of active site residues that do not contact ATP. We have used these observations to rationalize and synthesize highly selective inhibitors for p110 delta with greatly improved potencies.