학술논문

Exome-chip meta-analysis identifies novel loci associated with cardiac conduction, including ADAMTS6
Document Type
article
Author
Prins, Bram PMead, Timothy JBrody, Jennifer ASveinbjornsson, GardarNtalla, IoannaBihlmeyer, Nathan Avan den Berg, MartenBork-Jensen, JetteCappellani, StefaniaVan Duijvenboden, StefanKlena, Nikolai TGabriel, George CLiu, XiaoqinGulec, CagriGrarup, NielsHaessler, JeffreyHall, Leanne MIorio, AnnamariaIsaacs, AaronLi-Gao, RuifangLin, HonghuangLiu, Ching-TiLyytikäinen, Leo-PekkaMarten, JonathanMei, HaoMüller-Nurasyid, MartinaOrini, MichelePadmanabhan, SandoshRadmanesh, FaridRamirez, JuliaRobino, AntoniettaSchwartz, Mollyvan Setten, JessicaSmith, Albert VVerweij, NiekWarren, Helen RWeiss, StefanAlonso, AlvaroArnar, David OBots, Michiel Lde Boer, Rudolf ADominiczak, Anna FEijgelsheim, MarkEllinor, Patrick TGuo, XiuqingFelix, Stephan BHarris, Tamara BHayward, CarolineHeckbert, Susan RHuang, Paul LJukema, JWKähönen, MikaKors, Jan ALambiase, Pier DLauner, Lenore JLi, ManLinneberg, AllanNelson, Christopher PPedersen, OlufPerez, MarcoPeters, AnnettePolasek, OzrenPsaty, Bruce MRaitakari, Olli TRice, Kenneth MRotter, Jerome ISinner, Moritz FSoliman, Elsayed ZSpector, Tim DStrauch, KonstantinThorsteinsdottir, UnnurTinker, AndrewTrompet, StellaUitterlinden, AndréVaartjes, Iloncavan der Meer, PeterVölker, UweVölzke, HenryWaldenberger, MelanieWilson, James GXie, ZhijunAsselbergs, Folkert WDörr, Marcusvan Duijn, Cornelia MGasparini, PaoloGudbjartsson, Daniel FGudnason, VilmundurHansen, TorbenKääb, StefanKanters, Jørgen KKooperberg, CharlesLehtimäki, TerhoLin, Henry JLubitz, Steven AMook-Kanamori, Dennis OConti, Francesco JNewton-Cheh, Christopher HRosand, JonathanRudan, IgorSamani, Nilesh J
Source
Genome Biology. 19(1)
Subject
Biological Sciences
Biomedical and Clinical Sciences
Genetics
Human Genome
Heart Disease
Cardiovascular
2.1 Biological and endogenous factors
Aetiology
ADAMTS Proteins
Animals
Black People
Connexin 43
Electrocardiography
Exome
Female
Gene Expression
Gene Expression Profiling
Genetic Loci
Genome-Wide Association Study
Heart Conduction System
Humans
Male
Mice
Middle Aged
Myocardium
Open Reading Frames
Polymorphism
Single Nucleotide
White People
Exome Sequencing
Exome chip
Conduction
ADAMTS6
Meta-analysis
Environmental Sciences
Information and Computing Sciences
Bioinformatics
Language
Abstract
BackgroundGenome-wide association studies conducted on QRS duration, an electrocardiographic measurement associated with heart failure and sudden cardiac death, have led to novel biological insights into cardiac function. However, the variants identified fall predominantly in non-coding regions and their underlying mechanisms remain unclear.ResultsHere, we identify putative functional coding variation associated with changes in the QRS interval duration by combining Illumina HumanExome BeadChip genotype data from 77,898 participants of European ancestry and 7695 of African descent in our discovery cohort, followed by replication in 111,874 individuals of European ancestry from the UK Biobank and deCODE cohorts. We identify ten novel loci, seven within coding regions, including ADAMTS6, significantly associated with QRS duration in gene-based analyses. ADAMTS6 encodes a secreted metalloprotease of currently unknown function. In vitro validation analysis shows that the QRS-associated variants lead to impaired ADAMTS6 secretion and loss-of function analysis in mice demonstrates a previously unappreciated role for ADAMTS6 in connexin 43 gap junction expression, which is essential for myocardial conduction.ConclusionsOur approach identifies novel coding and non-coding variants underlying ventricular depolarization and provides a possible mechanism for the ADAMTS6-associated conduction changes.