학술논문

Single nuclei transcriptomics of muscle reveals intra-muscular cell dynamics linked to dystrophin loss and rescue
Document Type
article
Source
Communications Biology. 5(1)
Subject
Medical Physiology
Biomedical and Clinical Sciences
Rare Diseases
Genetics
Brain Disorders
Muscular Dystrophy
Pediatric
Regenerative Medicine
Intellectual and Developmental Disabilities (IDD)
Duchenne/ Becker Muscular Dystrophy
2.1 Biological and endogenous factors
Aetiology
Musculoskeletal
Animals
Dystrophin
Humans
Mice
Mice
Inbred mdx
Muscle
Skeletal
Muscular Dystrophy
Duchenne
Transcriptome
Biological sciences
Biomedical and clinical sciences
Language
Abstract
In Duchenne muscular dystrophy, dystrophin loss leads to chronic muscle damage, dysregulation of repair, fibro-fatty replacement, and weakness. We develop methodology to efficiently isolate individual nuclei from minute quantities of frozen skeletal muscle, allowing single nuclei sequencing of irreplaceable archival samples and from very small samples. We apply this method to identify cell and gene expression dynamics within human DMD and mdx mouse muscle, characterizing effects of dystrophin rescue by exon skipping therapy at single nuclei resolution. DMD exon 23 skipping events are directly observed and increased in myonuclei from treated mice. We describe partial rescue of type IIa and IIx myofibers, expansion of an MDSC-like myeloid population, recovery of repair/remodeling M2-macrophage, and repression of inflammatory POSTN1 + fibroblasts in response to exon skipping and partial dystrophin restoration. Use of this method enables exploration of cellular and transcriptomic mechanisms of dystrophin loss and repair within an intact muscle environment. Our initial findings will scaffold our future work to more directly examine muscular dystrophies and putative recovery pathways.