학술논문

Clinical and biochemical function of polymorphic NR0B1 GGAA-microsatellites in Ewing sarcoma: a report from the Children's Oncology Group.
Document Type
article
Source
PloS one. 9(8)
Subject
Humans
Cell Transformation
Neoplastic
RNA-Binding Protein EWS
Oncogene Proteins
Fusion
Prognosis
Case-Control Studies
Genomics
Age Factors
Gene Expression
Microsatellite Repeats
Linkage Disequilibrium
Polymorphism
Genetic
Alleles
Models
Biological
Adolescent
Child
Child
Preschool
Female
Male
Proto-Oncogene Protein c-fli-1
Young Adult
Genetic Loci
DAX-1 Orphan Nuclear Receptor
Sarcoma
Ewing
Nucleotide Motifs
Cell Transformation
Neoplastic
Oncogene Proteins
Fusion
Polymorphism
Genetic
Models
Biological
Preschool
Sarcoma
Ewing
General Science & Technology
Language
Abstract
BackgroundThe genetics involved in Ewing sarcoma susceptibility and prognosis are poorly understood. EWS/FLI and related EWS/ETS chimeras upregulate numerous gene targets via promoter-based GGAA-microsatellite response elements. These microsatellites are highly polymorphic in humans, and preliminary evidence suggests EWS/FLI-mediated gene expression is highly dependent on the number of GGAA motifs within the microsatellite.ObjectivesHere we sought to examine the polymorphic spectrum of a GGAA-microsatellite within the NR0B1 promoter (a critical EWS/FLI target) in primary Ewing sarcoma tumors, and characterize how this polymorphism influences gene expression and clinical outcomes.ResultsA complex, bimodal pattern of EWS/FLI-mediated gene expression was observed across a wide range of GGAA motifs, with maximal expression observed in constructs containing 20-26 GGAA motifs. Relative to white European and African controls, the NR0B1 GGAA-microsatellite in tumor cells demonstrated a strong bias for haplotypes containing 21-25 GGAA motifs suggesting a relationship between microsatellite function and disease susceptibility. This selection bias was not a product of microsatellite instability in tumor samples, nor was there a correlation between NR0B1 GGAA-microsatellite polymorphisms and survival outcomes.ConclusionsThese data suggest that GGAA-microsatellite polymorphisms observed in human populations modulate EWS/FLI-mediated gene expression and may influence disease susceptibility in Ewing sarcoma.