학술논문

NTR 2.0: a rationally engineered prodrug-converting enzyme with substantially enhanced efficacy for targeted cell ablation
Document Type
article
Source
Nature Methods. 19(2)
Subject
Biological Sciences
Regenerative Medicine
Stem Cell Research
Biotechnology
Stem Cell Research - Nonembryonic - Non-Human
5.2 Cellular and gene therapies
Development of treatments and therapeutic interventions
Animals
Animals
Genetically Modified
CHO Cells
Cricetulus
Green Fluorescent Proteins
HEK293 Cells
Humans
Metronidazole
Nitroreductases
Prodrugs
Protein Engineering
Recombinant Proteins
Retina
Vibrio
Zebrafish
Technology
Medical and Health Sciences
Developmental Biology
Biological sciences
Language
Abstract
Transgenic expression of bacterial nitroreductase (NTR) enzymes sensitizes eukaryotic cells to prodrugs such as metronidazole (MTZ), enabling selective cell-ablation paradigms that have expanded studies of cell function and regeneration in vertebrates. However, first-generation NTRs required confoundingly toxic prodrug treatments to achieve effective cell ablation, and some cell types have proven resistant. Here we used rational engineering and cross-species screening to develop an NTR variant, NTR 2.0, which exhibits ~100-fold improvement in MTZ-mediated cell-specific ablation efficacy, eliminating the need for near-toxic prodrug treatment regimens. NTR 2.0 therefore enables sustained cell-loss paradigms and ablation of previously resistant cell types. These properties permit enhanced interrogations of cell function, extended challenges to the regenerative capacities of discrete stem cell niches, and novel modeling of chronic degenerative diseases. Accordingly, we have created a series of bipartite transgenic reporter/effector resources to facilitate dissemination of NTR 2.0 to the research community.