학술논문

PhycoCosm, a comparative algal genomics resource
Document Type
article
Source
Nucleic Acids Research. 49(D1)
Subject
Biological Sciences
Bioinformatics and Computational Biology
Genetics
Microbiology
Plant Biology
Human Genome
Biotechnology
Generic health relevance
Algal Proteins
Computational Biology
Databases
Genetic
Energy Metabolism
Genome
Genomics
Internet
Molecular Sequence Annotation
Photosynthesis
Seaweed
User-Computer Interface
Web Browser
Environmental Sciences
Information and Computing Sciences
Developmental Biology
Biological sciences
Chemical sciences
Environmental sciences
Language
Abstract
Algae are a diverse, polyphyletic group of photosynthetic eukaryotes spanning nearly all eukaryotic lineages of life and collectively responsible for ∼50% of photosynthesis on Earth. Sequenced algal genomes, critical to understanding their complex biology, are growing in number and require efficient tools for analysis. PhycoCosm (https://phycocosm.jgi.doe.gov) is an algal multi-omics portal, developed by the US Department of Energy Joint Genome Institute to support analysis and distribution of algal genome sequences and other 'omics' data. PhycoCosm provides integration of genome sequence and annotation for >100 algal genomes with available multi-omics data and interactive web-based tools to enable algal research in bioenergy and the environment, encouraging community engagement and data exchange, and fostering new sequencing projects that will further these research goals.