학술논문

Comprehensive genomic profiles of small cell lung cancer
Document Type
article
Author
George, JulieLim, Jing ShanJang, Se JinCun, YupengOzretić, LukaKong, GuLeenders, FraukeLu, XinFernández-Cuesta, LynnetteBosco, GraziellaMüller, ChristianDahmen, IlonaJahchan, Nadine SPark, Kwon-SikYang, DianKarnezis, Anthony NVaka, DedeepyaTorres, AngelaWang, Maia SeguraKorbel, Jan OMenon, RoopikaChun, Sung-MinKim, DeokhoonWilkerson, MattHayes, NeilEngelmann, DavidPützer, BrigitteBos, MarcMichels, SebastianVlasic, IgnacijaSeidel, DanilaPinther, BeritSchaub, PhilippBecker, ChristianAltmüller, JanineYokota, JunKohno, TakashiIwakawa, ReikaTsuta, KojiNoguchi, MasayukiMuley, ThomasHoffmann, HansSchnabel, Philipp APetersen, IverChen, YuanSoltermann, AlexTischler, VerenaChoi, Chang-minKim, Yong-HeeMassion, Pierre PZou, YongJovanovic, DraganaKontic, MilicaWright, Gavin MRussell, Prudence ASolomon, BenjaminKoch, InaLindner, MichaelMuscarella, Lucia Ala Torre, AnnamariaField, John KJakopovic, MarkoKnezevic, JelenaCastaños-Vélez, EsmeraldaRoz, LucaPastorino, UgoBrustugun, Odd-TerjeLund-Iversen, MariusThunnissen, ErikKöhler, JensSchuler, MartinBotling, JohanSandelin, MartinSanchez-Cespedes, MontserratSalvesen, Helga BAchter, ViktorLang, UlrichBogus, MagdalenaSchneider, Peter MZander, ThomasAnsén, SaschaHallek, MichaelWolf, JürgenVingron, MartinYatabe, YasushiTravis, William DNürnberg, PeterReinhardt, ChristianPerner, SvenHeukamp, LukasBüttner, ReinhardHaas, Stefan ABrambilla, ElisabethPeifer, MartinSage, JulienThomas, Roman K
Source
Nature. 524(7563)
Subject
Biological Sciences
Biomedical and Clinical Sciences
Genetics
Oncology and Carcinogenesis
Human Genome
Cancer
Rare Diseases
Lung
Lung Cancer
Aetiology
2.1 Biological and endogenous factors
Alleles
Animals
Cell Line
Tumor
Chromosome Breakpoints
Cyclin D1
DNA-Binding Proteins
Disease Models
Animal
Female
Gene Expression Profiling
Genome
Human
Genomics
Humans
Lung Neoplasms
Male
Mice
Mutation
Neurosecretory Systems
Nuclear Proteins
Receptors
Notch
Retinoblastoma Protein
Signal Transduction
Small Cell Lung Carcinoma
Tumor Protein p73
Tumor Suppressor Protein p53
Tumor Suppressor Proteins
General Science & Technology
Language
Abstract
We have sequenced the genomes of 110 small cell lung cancers (SCLC), one of the deadliest human cancers. In nearly all the tumours analysed we found bi-allelic inactivation of TP53 and RB1, sometimes by complex genomic rearrangements. Two tumours with wild-type RB1 had evidence of chromothripsis leading to overexpression of cyclin D1 (encoded by the CCND1 gene), revealing an alternative mechanism of Rb1 deregulation. Thus, loss of the tumour suppressors TP53 and RB1 is obligatory in SCLC. We discovered somatic genomic rearrangements of TP73 that create an oncogenic version of this gene, TP73Δex2/3. In rare cases, SCLC tumours exhibited kinase gene mutations, providing a possible therapeutic opportunity for individual patients. Finally, we observed inactivating mutations in NOTCH family genes in 25% of human SCLC. Accordingly, activation of Notch signalling in a pre-clinical SCLC mouse model strikingly reduced the number of tumours and extended the survival of the mutant mice. Furthermore, neuroendocrine gene expression was abrogated by Notch activity in SCLC cells. This first comprehensive study of somatic genome alterations in SCLC uncovers several key biological processes and identifies candidate therapeutic targets in this highly lethal form of cancer.