학술논문

Evolution and clinical impact of co-occurring genetic alterations in advanced-stage EGFR-mutant lung cancers
Document Type
article
Source
Nature Genetics. 49(12)
Subject
Agricultural
Veterinary and Food Sciences
Biological Sciences
Bioinformatics and Computational Biology
Genetics
Agricultural Biotechnology
Cancer
Rare Diseases
Lung
Clinical Research
Lung Cancer
Detection
screening and diagnosis
4.1 Discovery and preclinical testing of markers and technologies
Carcinoma
Non-Small-Cell Lung
Cell Line
Tumor
Cell Proliferation
Class I Phosphatidylinositol 3-Kinases
Clonal Evolution
Cyclin-Dependent Kinases
ErbB Receptors
Gene Expression Regulation
Neoplastic
Humans
Kaplan-Meier Estimate
Lung Neoplasms
Mutation
Neoplasm Staging
Protein Kinase Inhibitors
Wnt Signaling Pathway
beta Catenin
Medical and Health Sciences
Developmental Biology
Agricultural biotechnology
Bioinformatics and computational biology
Language
Abstract
A widespread approach to modern cancer therapy is to identify a single oncogenic driver gene and target its mutant-protein product (for example, EGFR-inhibitor treatment in EGFR-mutant lung cancers). However, genetically driven resistance to targeted therapy limits patient survival. Through genomic analysis of 1,122 EGFR-mutant lung cancer cell-free DNA samples and whole-exome analysis of seven longitudinally collected tumor samples from a patient with EGFR-mutant lung cancer, we identified critical co-occurring oncogenic events present in most advanced-stage EGFR-mutant lung cancers. We defined new pathways limiting EGFR-inhibitor response, including WNT/β-catenin alterations and cell-cycle-gene (CDK4 and CDK6) mutations. Tumor genomic complexity increases with EGFR-inhibitor treatment, and co-occurring alterations in CTNNB1 and PIK3CA exhibit nonredundant functions that cooperatively promote tumor metastasis or limit EGFR-inhibitor response. This study calls for revisiting the prevailing single-gene driver-oncogene view and links clinical outcomes to co-occurring genetic alterations in patients with advanced-stage EGFR-mutant lung cancer.