학술논문

A novel DPH5-related diphthamide-deficiency syndrome causing embryonic lethality or profound neurodevelopmental disorder
Document Type
article
Author
Shankar, Suma PGrimsrud, KristinLanoue, LouiseEgense, AlenaWillis, BrandonHörberg, JohannaAlAbdiMayer, KlausÜtkür, KorayMonaghan, Kristin GKrier, JoelStoler, JoanAlnemer, MahaShankar, Prabhu RSchaffrath, RaffaelAlkuraya, Fowzan SBrinkmann, UlrichEriksson, Leif ALloyd, KentRauen, Katherine ANetwork, Undiagnosed DiseasesAcosta, Maria TAdam, MargaretAdams, David RAlvey, JustinAmendola, LauraAndrews, AshleyAshley, Euan AAzamian, Mahshid SBacino, Carlos ABademci, GuneyBalasubramanyam, AshokBaldridge, DustinBale, JimBamshad, MichaelBarbouth, DeborahBayrak-Toydemir, PinarBeck, AnitaBeggs, Alan HBehrens, EdwardBejerano, GillBennet, JimmyBerg-Rood, BeverlyBernstein, Jonathan ABerry, Gerard TBican, AnnaBivona, StephanieBlue, ElizabethBohnsack, JohnBonner, DevonBotto, LorenzoBoyd, BrennaBriere, Lauren CBrokamp, EllyBrown, GabrielleBurke, Elizabeth ABurrage, Lindsay CButte, Manish JByers, PeterByrd, William ECarey, JohnCarrasquillo, OlveenCassini, ThomasChang, Ta Chen PeterChanprasert, SirisakChao, Hsiao-TuanClark, Gary DCoakley, Terra RCobban, Laurel ACogan, Joy DCoggins, MatthewCole, F SessionsColley, Heather ACooper, Cynthia MCope, HeidiCraigen, William JCrouse, Andrew BCunningham, MichaelD'Souza, PrecillaDai, HongzhengDasari, SurendraDavis, JoieDayal, Jyoti GDeardorff, MatthewDell'Angelica, Esteban CDipple, KatrinaDoherty, DanielDorrani, NaghmehDoss, Argenia LDouine, Emilie DDuncan, LauraEarl, DawnEckstein, David JEmrick, Lisa TEng, Christine MEsteves, CeciliaFalk, MarniFernandez, LilianaFieg, Elizabeth LFisher, Paul G
Source
Genetics in Medicine. 24(7)
Subject
Biological Sciences
Bioinformatics and Computational Biology
Genetics
Pediatric
Human Genome
2.1 Biological and endogenous factors
Aetiology
Adenosine Diphosphate
Animals
Histidine
Humans
Methyltransferases
Mice
Mice
Inbred C57BL
Neurodevelopmental Disorders
Saccharomyces cerevisiae
Saccharomyces cerevisiae Proteins
Syndrome
Nonverbal neurodevelopment delays
Novel gene discovery
Precision animal modeling
Precision genomics
Translational genetics
Undiagnosed Diseases Network
Clinical Sciences
Genetics & Heredity
Language
Abstract
PurposeDiphthamide is a post-translationally modified histidine essential for messenger RNA translation and ribosomal protein synthesis. We present evidence for DPH5 as a novel cause of embryonic lethality and profound neurodevelopmental delays (NDDs).MethodsMolecular testing was performed using exome or genome sequencing. A targeted Dph5 knockin mouse (C57BL/6Ncrl-Dph5em1Mbp/Mmucd) was created for a DPH5 p.His260Arg homozygous variant identified in 1 family. Adenosine diphosphate-ribosylation assays in DPH5-knockout human and yeast cells and in silico modeling were performed for the identified DPH5 potential pathogenic variants.ResultsDPH5 variants p.His260Arg (homozygous), p.Asn110Ser and p.Arg207Ter (heterozygous), and p.Asn174LysfsTer10 (homozygous) were identified in 3 unrelated families with distinct overlapping craniofacial features, profound NDDs, multisystem abnormalities, and miscarriages. Dph5 p.His260Arg homozygous knockin was embryonically lethal with only 1 subviable mouse exhibiting impaired growth, craniofacial dysmorphology, and multisystem dysfunction recapitulating the human phenotype. Adenosine diphosphate-ribosylation assays showed absent to decreased function in DPH5-knockout human and yeast cells. In silico modeling of the variants showed altered DPH5 structure and disruption of its interaction with eEF2.ConclusionWe provide strong clinical, biochemical, and functional evidence for DPH5 as a novel cause of embryonic lethality or profound NDDs with multisystem involvement and expand diphthamide-deficiency syndromes and ribosomopathies.