학술논문

Comprehensive Analysis of Hypermutation in Human Cancer
Document Type
article
Source
Cell. 171(5)
Subject
Biological Sciences
Biomedical and Clinical Sciences
Genetics
Oncology and Carcinogenesis
Human Genome
Cancer
Rare Diseases
Cancer Genomics
2.1 Biological and endogenous factors
Good Health and Well Being
Adult
Child
Cluster Analysis
DNA Polymerase II
DNA Polymerase III
DNA Replication
Humans
Mutation
Neoplasms
Poly-ADP-Ribose Binding Proteins
DNA repair
DNA replication
cancer genomics
cancer predisposition
hypermutation
immune checkpoint inhibitors
mismatch repair
mutator
Medical and Health Sciences
Developmental Biology
Biological sciences
Biomedical and clinical sciences
Language
Abstract
We present an extensive assessment of mutation burden through sequencing analysis of >81,000 tumors from pediatric and adult patients, including tumors with hypermutation caused by chemotherapy, carcinogens, or germline alterations. Hypermutation was detected in tumor types not previously associated with high mutation burden. Replication repair deficiency was a major contributing factor. We uncovered new driver mutations in the replication-repair-associated DNA polymerases and a distinct impact of microsatellite instability and replication repair deficiency on the scale of mutation load. Unbiased clustering, based on mutational context, revealed clinically relevant subgroups regardless of the tumors' tissue of origin, highlighting similarities in evolutionary dynamics leading to hypermutation. Mutagens, such as UV light, were implicated in unexpected cancers, including sarcomas and lung tumors. The order of mutational signatures identified previous treatment and germline replication repair deficiency, which improved management of patients and families. These data will inform tumor classification, genetic testing, and clinical trial design.