학술논문

Discovery and Mechanism of SARS-CoV‑2 Main Protease Inhibitors
Document Type
article
Source
Journal of Medicinal Chemistry. 65(4)
Subject
Medicinal and Biomolecular Chemistry
Chemical Sciences
Pneumonia
Emerging Infectious Diseases
Vaccine Related
Prevention
Pneumonia & Influenza
Lung
Biodefense
Infectious Diseases
Development of treatments and therapeutic interventions
5.1 Pharmaceuticals
Good Health and Well Being
Animals
Antiviral Agents
Benzothiazoles
COVID-19
Chlorocebus aethiops
Coronavirus 3C Proteases
Crystallography
X-Ray
Cysteine Proteinase Inhibitors
Dose-Response Relationship
Drug
Drug Discovery
Fluorescence Resonance Energy Transfer
Humans
Microbial Sensitivity Tests
Molecular Docking Simulation
Molecular Structure
SARS-CoV-2
Vero Cells
Virus Replication
COVID-19 Drug Treatment
Organic Chemistry
Pharmacology and Pharmaceutical Sciences
Medicinal & Biomolecular Chemistry
Pharmacology and pharmaceutical sciences
Medicinal and biomolecular chemistry
Organic chemistry
Language
Abstract
The emergence of a new coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), presents an urgent public health crisis. Without available targeted therapies, treatment options remain limited for COVID-19 patients. Using medicinal chemistry and rational drug design strategies, we identify a 2-phenyl-1,2-benzoselenazol-3-one class of compounds targeting the SARS-CoV-2 main protease (Mpro). FRET-based screening against recombinant SARS-CoV-2 Mpro identified six compounds that inhibit proteolysis with nanomolar IC50 values. Preincubation dilution experiments and molecular docking determined that the inhibition of SARS-CoV-2 Mpro can occur by either covalent or noncovalent mechanisms, and lead E04 was determined to inhibit Mpro competitively. Lead E24 inhibited viral replication with a nanomolar EC50 value (844 nM) in SARS-CoV-2-infected Vero E6 cells and was further confirmed to impair SARS-CoV-2 replication in human lung epithelial cells and human-induced pluripotent stem cell-derived 3D lung organoids. Altogether, these studies provide a structural framework and mechanism of Mpro inhibition that should facilitate the design of future COVID-19 treatments.