학술논문

Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
Document Type
article
Source
Nature Communications. 13(1)
Subject
Influenza
Infectious Diseases
Pneumonia & Influenza
Biodefense
Vaccine Related
Human Genome
Prevention
Emerging Infectious Diseases
Genetics
2.2 Factors relating to the physical environment
Aetiology
Infection
Genome
Viral
Genomics
Humans
Influenza A Virus
H1N1 Subtype
Influenza A virus
Influenza
Human
Language
Abstract
The 1918 influenza pandemic was the deadliest respiratory pandemic of the 20th century and determined the genomic make-up of subsequent human influenza A viruses (IAV). Here, we analyze both the first 1918 IAV genomes from Europe and the first from samples prior to the autumn peak. 1918 IAV genomic diversity is consistent with a combination of local transmission and long-distance dispersal events. Comparison of genomes before and during the pandemic peak shows variation at two sites in the nucleoprotein gene associated with resistance to host antiviral response, pointing at a possible adaptation of 1918 IAV to humans. Finally, local molecular clock modeling suggests a pure pandemic descent of seasonal H1N1 IAV as an alternative to the hypothesis of origination through an intrasubtype reassortment.