학술논문

Two Functional Lupus-Associated BLK Promoter Variants Control Cell-Type- and Developmental-Stage-Specific Transcription
Document Type
article
Source
American Journal of Human Genetics. 94(4)
Subject
Biological Sciences
Biomedical and Clinical Sciences
Genetics
Lupus
Autoimmune Disease
Clinical Research
Stem Cell Research
Aetiology
2.1 Biological and endogenous factors
Inflammatory and immune system
Alleles
Chromosomes
Human
Pair 8
Electrophoretic Mobility Shift Assay
Female
Genetic Predisposition to Disease
Haplotypes
Humans
Lupus Erythematosus
Systemic
Male
Polymorphism
Single Nucleotide
Promoter Regions
Genetic
Transcription
Genetic
src-Family Kinases
Medical and Health Sciences
Genetics & Heredity
Biological sciences
Biomedical and clinical sciences
Health sciences
Language
Abstract
Efforts to identify lupus-associated causal variants in the FAM167A/BLK locus on 8p21 are hampered by highly associated noncausal variants. In this report, we used a trans-population mapping and sequencing strategy to identify a common variant (rs922483) in the proximal BLK promoter and a tri-allelic variant (rs1382568) in the upstream alternative BLK promoter as putative causal variants for association with systemic lupus erythematosus. The risk allele (T) at rs922483 reduced proximal promoter activity and modulated alternative promoter usage. Allelic differences at rs1382568 resulted in altered promoter activity in B progenitor cell lines. Thus, our results demonstrated that both lupus-associated functional variants contribute to the autoimmune disease association by modulating transcription of BLK in B cells and thus potentially altering immune responses.