학술논문

Detection and validation of novel mutations in MERTK in a simplex case of retinal degeneration using WGS and hiPSC–RPEs model
Document Type
article
Source
Human Mutation. 42(2)
Subject
Eye Disease and Disorders of Vision
Genetics
Neurodegenerative
Human Genome
Stem Cell Research - Induced Pluripotent Stem Cell
Stem Cell Research - Induced Pluripotent Stem Cell - Human
Rare Diseases
Stem Cell Research
Biotechnology
Neurosciences
Aetiology
2.1 Biological and endogenous factors
Eye
Female
Humans
Induced Pluripotent Stem Cells
Leukocytes
Mononuclear
Mutation
Phagocytosis
Retinal Degeneration
Retinal Pigment Epithelium
Whole Genome Sequencing
c-Mer Tyrosine Kinase
disease modelling
human iPSC‐
RPE
inherited retinal degenerations
RPE phagocytosis
whole genome sequencing
human iPSC-RPE
Clinical Sciences
Genetics & Heredity
Language
Abstract
Inherited retinal degenerations (IRDs) are a group of genetically heterogeneous conditions with a broad phenotypic heterogeneity. Here, we report detection and validation of the underlying cause of progressive retinal degeneration in a nuclear family of European descent with a single affected individual. Whole genome sequencing of the proband and her unaffected sibling identified a novel intron 8 donor splice site variant (c.1296 + 1G>A) and a novel 731 base pair deletion encompassing exon 9 (Chr2:g.112751488_112752218 del) resulting in c.1297_1451del; p.K433_G484fsTer3 in the Mer tyrosine kinase protooncogene (MERTK), which is highly expressed in the retinal pigment epithelium (RPE). The proband carried both variants in the heterozygous state, which segregated with disease in the pedigree. These MERTK variants are predicted to result in the defective splicing of exon 8 and loss of exon 9 respectively. To evaluate the impact of these novel variants, peripheral blood mononuclear cells of the proband and her parents were reprogrammed to humaninduced pluripotent stem cell (hiPSC) lines, which were subsequently differentiated to hiPSC-RPE. Analysis of the proband's hiPSC-RPE revealed the absence of both MERTK transcript and its respective protein as well as abnormal phagocytosis when compared with the parental hiPSC-RPE. In summary, whole genome sequencing identified novel compound heterozygous variants in MERTK as the underlying cause of progressive retinal degeneration in a simplex case. Further, analysis using an hiPSC-RPE model established the functional impact of novel MERTK mutations and revealed the potential mechanism underlying pathology in the proband.