학술논문

DNA interference states of the hypercompact CRISPR–CasΦ effector
Document Type
article
Source
Nature Structural & Molecular Biology. 28(8)
Subject
Biochemistry and Cell Biology
Biological Sciences
Genetics
Biotechnology
1.1 Normal biological development and functioning
Underpinning research
Generic health relevance
Bacteriophages
CRISPR-Associated Proteins
CRISPR-Cas Systems
Clustered Regularly Interspaced Short Palindromic Repeats
DNA
DNA Cleavage
DNA-Binding Proteins
Gene Editing
Genetic Techniques
Molecular Conformation
RNA
Guide
Kinetoplastida
Chemical Sciences
Medical and Health Sciences
Biophysics
Developmental Biology
Biological sciences
Biomedical and clinical sciences
Chemical sciences
Language
Abstract
CRISPR-CasΦ, a small RNA-guided enzyme found uniquely in bacteriophages, achieves programmable DNA cutting as well as genome editing. To investigate how the hypercompact enzyme recognizes and cleaves double-stranded DNA, we determined cryo-EM structures of CasΦ (Cas12j) in pre- and post-DNA-binding states. The structures reveal a streamlined protein architecture that tightly encircles the CRISPR RNA and DNA target to capture, unwind and cleave DNA. Comparison of the pre- and post-DNA-binding states reveals how the protein rearranges for DNA cleavage upon target recognition. On the basis of these structures, we created and tested mutant forms of CasΦ that cut DNA up to 20-fold faster relative to wild type, showing how this system may be naturally attenuated to improve the fidelity of DNA interference. The structural and mechanistic insights into how CasΦ binds and cleaves DNA should allow for protein engineering for both in vitro diagnostics and genome editing.