학술논문

Genealogical Diversity of Endogenous Retrovirus in the Jawless Fish Genome
Document Type
Article
Source
Journal of Microbiology and Biotechnology. Nov 30, 2023 33(11):1412
Subject
Endogenous retrovirus
jawless fish
foamy virus
codon usage
virus infection
co-evolution
Language
Korean
English
ISSN
1017-7825
Abstract
Retroviral integration into ancient vertebrate genomes left traces that can shed light on the early history of viruses. In this study, we explored the early evolution of retroviruses by isolating nine Spuma endogenous retroviruses (ERVs) and one Epsilon ERV from the genomes of Agnatha and Chondrichthyes. Phylogenetic analysis of protein sequences revealed a striking pattern of coevolution between jawless fish ERV and their host, while shark ERV underwent ancient cross-class viral transmission with jawless fish, ray-finned fish, and amphibians. Nucleotide sequence analysis showed that jawless fish ERV emerged in the Palaeozoic period, relatively later than ray-finned fish ERV. Moreover, codon analysis suggested that the jawless fish ERV employed an infection strategy that mimics the host codon. The genealogical diversity of ERVs in the jawless fish genome highlights the importance of studying different viral species. Overall, our findings provide valuable insights into the evolution of retroviruses and their interactions with their hosts.