학술논문

Statistical Power of Rare Variant Analysis on Serum Urate Levels / まれな変異に重点を置いた尿酸値の遺伝率の研究
Document Type
Journal Article
Source
痛風と尿酸・核酸 / Gout and Uric & Nucleic Acids. 2021, 45(1):23
Subject
genome-wide association study
gout
heritability
rare variants
serum urate level
まれな変異
ゲノムワイド関連解析
尿酸値
痛風
遺伝率
Language
Japanese
ISSN
2435-0095
Abstract
Gout is a common arthritis caused by monosodium urate crystals. Familial studies have shown that the heritability of serum urate levels is estimated to be 30-70%. By a gene-based test, a recent study suggested that rare variants are major contributors to the heritability of serum urate levels. Gene-based analysis considers the effect of multiple genetic variants in one gene in a single test. In this article, the relationship between the sample size and potency of a gene-based test was examined. We divided a hypothetical population into two groups: those who have rare variations and those who do not. It was considered that the difference in uric acid concentrations between the two groups was the same as the difference caused by the presence or absence of URAT1 variants in previous studies. Uric acid levels in each person were also considered to follow a normal distribution, with the expectation being the average of the group to which the person belonged. Under these conditions, the statistical power of the gene-based test was computed. The results showed that the gene-based test boosted the power of the test so that rare variants were detected in far fewer people than the SNP-based test. This study suggests the potential for studying "common diseases, rare variations" by a gene-based test, in addition to "common diseases, common variations.”