학술논문

Buried Asparagines Determine the Dimerization Specificities of Leucine Zipper Mutants
Document Type
research-article
Source
Proceedings of the National Academy of Sciences of the United States of America, 1997 Apr . 94(8), 3673-3678.
Subject
Biochemistry
Protein structure
Site-directed mutagenesis
Recombinant fusion proteins
Genetics
Dimerization
Dimers
Immunity
Amino acids
Titration
Plasmids
Biochemistry
Mutagenesis
DNA
Bacteriophages
Language
English
ISSN
00278424
Abstract
Regulation of gene expression by many transcription factors is controlled by specific combinations of homo- and heterodimers through a short α -helical coiled-coil known as a leucine zipper. The dimer interface of a leucine zipper involves side chains of the residues at the a, d, e, and g positions of the (abcdefg) n heptad repeat. To understand the basis for the specificity of dimer formation, we characterized GCN4 leucine zipper mutants with all 16 possible permutations and combinations of isoleucines and asparagines at four a positions in the dimer interface, using a genetic test for the specificity of dimer formation by λ repressor-leucine zipper fusions. Heterodimers were detected by loss of repressor activity in the presence of a fusion to a dominant-negative mutant form of the DNA-binding domain of repressor. Reconstruction experiments using leucine zippers from GCN4, Jun, Fos, and C/EBP showed that this assay distinguishes pairs that form heterodimers from those that do not. We found that the mutants have novel dimerization specificities determined by the positioning of buried asparagine residues at the a positions. The pattern of buried polar residues could also explain the dimerization specificities of some naturally occurring leucine zippers. The altered specificity mutants described here should be useful for the construction of artificial regulatory circuitry.