학술논문

Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota
Document Type
Report
Source
Nature Genetics. November, 2016, Vol. 48 Issue 11, p1396, 11 p.
Subject
Genome-wide association studies -- Methods
Microbiota (Symbiotic organisms) -- Genetic aspects -- Health aspects
Genetic variation -- Identification and classification
Language
English
ISSN
1061-4036
Abstract
Human gut microbiota is an important determinant for health and disease, and recent studies emphasize the numerous factors shaping its diversity. Here we performed a genome-wide association study (GWAS) of the gut microbiota using two cohorts from northern Germany totaling 1,812 individuals. Comprehensively controlling for diet and non-genetic parameters, we identify genome-wide significant associations for overall microbial variation and individual taxa at multiple genetic loci, including the VDR gene (encoding vitamin D receptor). We observe significant shifts in the microbiota of Vdr[sup.-/-] mice relative to control mice and correlations between the microbiota and serum measurements of selected bile and fatty acids in humans, including known ligands and downstream metabolites of VDR. Genome-wide significant (P [less than] 5 x 10[sup.-8]) associations at multiple additional loci identify other important points of host-microbe intersection, notably several disease susceptibility genes and sterol metabolism pathway components. Non-genetic and genetic factors each account for approximately 10% of the variation in gut microbiota, whereby individual effects are relatively small.
Author(s): Jun Wang [1, 2]; Louise B Thingholm [3]; Jurgita Skiecevi[c caron]ien[e dot] [3]; Philipp Rausch [1, 2]; Martin Kummen [4, 5, 6, 7]; Johannes R Hov [4, 5, 6, [...]