학술논문

Gene Co-Expression Network Analysis of Reproductive Traits in Bovine Genome
Document Type
Article
Text
Source
Reproductive & developmental biology, 12/30/2013, Vol. 37, Issue 4, p. 185-192
Subject
Reproduction
Gene Co-expression Network (GCN)
Cattle
Language
영어(ENG)
ISSN
1738-2432
Abstract
Many countries have implemented genetic evaluation for fertility traits in recent years. In particular, reproductive trait is a complex trait and need to require a system-level approach for identifying candidate genes related to the trait. To find the candidate gene associated with reproductive trait, we applied a weighted gene co-expression network analysis from expression value of bovine genes. We identified three co-expressed modules associated with reproductive trait from bovine microarray data. Hub genes (ZP4, FHL2 and EGR4) were determined in each module; they were topologically centered with statistically significant value in the gene co-expression network. We were able to find the highly co-expressed gene pairs with a correlation coefficient. Finally, the crucial functions of co-expressed modules were reported from functional enrichment analysis. We suggest that the network-based approach in livestock may an important method for analyzing the complex effects of candidate genes associated with economic traits like reproduction.