학술논문

DeepLBS: A deep Convolutional Neural Network-Based Ligand-Binding Site Prediction Tool
Document Type
Conference
Source
2023 6th International Conference on Information Systems and Computer Networks (ISCON) Information Systems and Computer Networks (ISCON), 2023 6th International Conference on. :1-4 Mar, 2023
Subject
Communication, Networking and Broadcast Technologies
Components, Circuits, Devices and Systems
Computing and Processing
Engineering Profession
Fields, Waves and Electromagnetics
Power, Energy and Industry Applications
Robotics and Control Systems
Signal Processing and Analysis
Proteins
Deep learning
Art
Machine learning algorithms
Throughput
Prediction algorithms
Computer networks
Convolutional neural network
deep neural network
ligand binding site
machine learning
proteomics
Language
ISSN
2832-143X
Abstract
In the recent past, with the improvement of high throughput technology, the availability of protein structural data has increased exponentially. All these structural data have to be correctly mapped to their functional attributes to decode their biological role. However, to perform the functional annotation of these structural entities, the essential move is to locate the ligand-binding site (LBS) information. Although many approaches have been proposed to locate the LBS, most have low performance in terms of predictive quality. In this proposed work, we are presenting a deep neural network-based approach, DeepLBS, which uses geometrical as well as pharmacophoric properties to quantify the ligand-binding site (LBS) with high accuracy. To determine the efficiency of our work, DeepLBS was compared with the most recently developed deep learning tools. The result demonstrated that DeepLBS outperformed the existing state of art tools in terms of predictive quality.