학술논문

Tracking Growth and Decay of Plant Roots in Minirhizotron Images
Document Type
Conference
Source
2023 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV) WACV Applications of Computer Vision (WACV), 2023 IEEE/CVF Winter Conference on. :3688-3697 Jan, 2023
Subject
Computing and Processing
Engineering Profession
Computer vision
Codes
Neural networks
User interfaces
Monitoring
Applications: Environmental monitoring/climate change/ecology
Agriculture
Language
ISSN
2642-9381
Abstract
Plant roots are difficult to monitor and study since they are hidden belowground. Minirhizotrons offer an in-situ monitoring solution but their widespread adoption is still limited by the capabilities of automatic analysis methods. These capabilities so far consist only of estimating a single number (total root length) per image.We propose a method for a more fine-grained analysis which estimates the root turnover, i.e. the amount of root growth and decay between two minirhizotron images. It consists of a neural network that computes which roots are visible in both images and is trained in an unsupervised manner without additional annotations.Our code is available as a part of an analysis tool with a user interface ready to be used by ecologists. 1