학술논문

Semi-Supervised Tumor Response Grade Classification from Histology Images of Colorectal Liver Metastases
Document Type
Conference
Source
2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI) Biomedical Imaging (ISBI), 2022 IEEE 19th International Symposium on. :1-5 Mar, 2022
Subject
Bioengineering
Computing and Processing
Photonics and Electrooptics
Signal Processing and Analysis
Training
Chemotherapy
Annotations
Histopathology
Biological system modeling
Pipelines
Liver
Colorectal cancer
deep learning
Mean Teacher
histopathology
semi-supervised learning
tumor regression grade
Language
ISSN
1945-8452
Abstract
Colorectal liver metastases (CLM) develop in almost half of patients with colon cancer. Response to systemic chemotherapy is the main determinant of patient survival. Due to the importance of assessing treatment response of CLM to chemotherapy for the patient prognosis, there is a need to classify tumor response grade (TRG) on histopathology slides (HPS). However, annotating HPS for training neural networks is a time-consuming task. In this work, we present an end-to-end approach for tissue classification of CLM slides leading to TRG prediction. A weakly-supervised model is first trained to perform tissue classification from sparse annotations, generating segmentation maps. Then, using features extracted for these maps, a secondary model is trained to perform the TRG classification. We demonstrate the feasibility of the proposed approach on a clinical dataset of 1450 HPS from 232 CLM patients by comparing our semi-supervised Mean Teacher approach with other supervised and semi-supervised methods. The proposed pipeline outperforms other models, achieving a classification accuracy of 94.4%. Based on the generated classification maps, the model is able to stratify patients into two TRG classes (1-2 vs 3-5) with an accuracy of 86.2%.